Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG04199	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	STU	SAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG04199	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	STU	SAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG04199	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0275	STU	SAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG04199	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0007	STU	SAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG04199	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0234	STU	SAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG04199	hp2	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0258	STU	SAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG04199	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0172	STU	SAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG04199	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0069	STU	SAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG04199	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0038	STU	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG04199	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0005	STU	SAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG04199	hp1	a0001	a0001c0002	a0001c0002t0009	a0001c0002t0009g0117	STU	SAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG04199	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0347	STU	SAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG04199	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	STU	SAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG04199	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	STU	SAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG04199	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	STU	SAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG04199	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0125	STU	SAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG04199	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0090	STU	SAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG04199	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0334	STU	SAS	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	HG04199	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	STU	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG04199	hp2	a0002	a0002c0003	a0002c0003t0005	a0002c0003t0005g0005	STU	SAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG04199	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0147	STU	SAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG04199	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0252	STU	SAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG04199	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0079	STU	SAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG04199	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	STU	SAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG04199	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	STU	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG04199	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0135	STU	SAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG04199	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0240	STU	SAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG04199	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0293	STU	SAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG04199	hp1	a0001	a0001c0003	a0001c0003t0142	a0001c0003t0142g0214	STU	SAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG04199	hp2	a0002	a0002c0002	a0002c0002t0039	a0002c0002t0039g0004	STU	SAS	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	HG04199	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	STU	SAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG04199	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	STU	SAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG04199	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	STU	SAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG04199	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	STU	SAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG04199	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0072	STU	SAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG04199	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0107	STU	SAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG04199	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	STU	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG04199	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	STU	SAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG04199	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0297	STU	SAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG04199	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0256	STU	SAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG04199	hp1	a0007	a0007c0010	a0007c0010t0002	a0007c0010t0002g0041	STU	SAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG04199	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0009	STU	SAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG04199	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	STU	SAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG04199	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0151	STU	SAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG04199	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0004	STU	SAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG04199	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0042	STU	SAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG04199	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0143	STU	SAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG04199	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0107	STU	SAS	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	HG04199	hp1	a0003	a0003c0007	a0003c0007t0001	a0003c0007t0001g0262	STU	SAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG04199	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0185	STU	SAS	AATK	chr17	81112295	81171221