Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02109	hp1	a0002	a0002c0002	a0002c0002t0008	a0002c0002t0008g0025	ACB	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02109	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0053	ACB	AFR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG02109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0204	ACB	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0103	ACB	AFR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02109	hp1	a0006	a0006c0011	a0006c0011t0002	a0006c0011t0002g0038	ACB	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02109	hp2	a0012	a0012c0022	a0012c0022t0007	a0012c0022t0007g0036	ACB	AFR	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	HG02109	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0087	ACB	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02109	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0052	ACB	AFR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02109	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0290	ACB	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02109	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0244	ACB	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0033	ACB	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02109	hp2	a0001	a0001c0003	a0001c0003t0005	a0001c0003t0005g0044	ACB	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0170	ACB	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02109	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0014	ACB	AFR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG02109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0066	ACB	AFR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02109	hp2	a0002	a0002c0005	a0002c0005t0001	a0002c0005t0001g0015	ACB	AFR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02109	hp1	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0004	ACB	AFR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02109	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0098	ACB	AFR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02109	hp1	a0019	a0019c0036	a0019c0036t0007	a0019c0036t0007g0040	ACB	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02109	hp2	a0001	a0001c0001	a0001c0001t0018	a0001c0001t0018g0039	ACB	AFR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02109	hp1	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0054	ACB	AFR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0200	ACB	AFR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG02109	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0010	ACB	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02109	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0043	ACB	AFR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0112	ACB	AFR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0060	ACB	AFR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02109	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0250	ACB	AFR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02109	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0073	ACB	AFR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG02109	hp1	a0001	a0001c0001	a0001c0001t0045	a0001c0001t0045g0287	ACB	AFR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02109	hp2	a0004	a0004c0012	a0004c0012t0061	a0004c0012t0061g0067	ACB	AFR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG02109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0213	ACB	AFR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02109	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0236	ACB	AFR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	ACB	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	ACB	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	ACB	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	ACB	AFR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0026	ACB	AFR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02109	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0165	ACB	AFR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02109	hp1	a0002	a0002c0002	a0002c0002t0012	a0002c0002t0012g0005	ACB	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02109	hp2	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0005	ACB	AFR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02109	hp1	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0149	ACB	AFR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02109	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0346	ACB	AFR	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	HG02109	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	ACB	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	ACB	AFR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG02109	hp1	a0001	a0001c0001	a0001c0001t0023	a0001c0001t0023g0092	ACB	AFR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0101	ACB	AFR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG02109	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0009	ACB	AFR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0158	ACB	AFR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG02109	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0002	ACB	AFR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02109	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0062	ACB	AFR	AASS	chr7	122068549	122149249