Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA20129	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	ASW	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA20129	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0011	ASW	AFR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA20129	hp1	a0002	a0002c0004	a0002c0004t0044	a0002c0004t0044g0049	ASW	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA20129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0035	ASW	AFR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA20129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0271	ASW	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA20129	hp2	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0075	ASW	AFR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA20129	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0091	ASW	AFR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA20129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0240	ASW	AFR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA20129	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0031	ASW	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA20129	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0045	ASW	AFR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA20129	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0352	ASW	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA20129	hp2	a0005	a0005c0006	a0005c0006t0001	a0005c0006t0001g0005	ASW	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA20129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0126	ASW	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA20129	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0020	ASW	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA20129	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0133	ASW	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA20129	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0014	ASW	AFR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA20129	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	ASW	AFR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA20129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0085	ASW	AFR	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	NA20129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	ASW	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA20129	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0037	ASW	AFR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA20129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	ASW	AFR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA20129	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0055	ASW	AFR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA20129	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	ASW	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA20129	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0012	ASW	AFR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA20129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0042	ASW	AFR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA20129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0075	ASW	AFR	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	NA20129	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0152	ASW	AFR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA20129	hp2	a0001	a0001c0003	a0001c0003t0064	a0001c0003t0064g0085	ASW	AFR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA20129	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0079	ASW	AFR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA20129	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0252	ASW	AFR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA20129	hp1	a0006	a0006c0010	a0006c0010t0001	a0006c0010t0001g0054	ASW	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA20129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	ASW	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA20129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	ASW	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA20129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	ASW	AFR	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA20129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	ASW	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA20129	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0003	ASW	AFR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA20129	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0324	ASW	AFR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA20129	hp2	a0006	a0006c0018	a0006c0018t0001	a0006c0018t0001g0016	ASW	AFR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA20129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	ASW	AFR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA20129	hp2	a0005	a0005c0007	a0005c0007t0009	a0005c0007t0009g0018	ASW	AFR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA20129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0146	ASW	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA20129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	ASW	AFR	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	NA20129	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0003	ASW	AFR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA20129	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0292	ASW	AFR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA20129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0079	ASW	AFR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA20129	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0002	ASW	AFR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA20129	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0227	ASW	AFR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA20129	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0069	ASW	AFR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	NA20129	hp1	a0006	a0006c0013	a0006c0013t0001	a0006c0013t0001g0224	ASW	AFR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA20129	hp2	a0005	a0005c0006	a0005c0006t0003	a0005c0006t0003g0115	ASW	AFR	AATK	chr17	81112295	81171221