Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02717	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	GWD	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02717	hp2	a0009	a0009c0011	a0009c0011t0001	a0009c0011t0001g0063	GWD	AFR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG02717	hp1	a0001	a0001c0005	a0001c0005t0048	a0001c0005t0048g0209	GWD	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02717	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0201	GWD	AFR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02717	hp1	a0032	a0032c0041	a0032c0041t0001	a0032c0041t0001g0221	GWD	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02717	hp2	a0040	a0040c0036	a0040c0036t0001	a0040c0036t0001g0170	GWD	AFR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG02717	hp1	a0001	a0001c0005	a0001c0005t0002	a0001c0005t0002g0019	GWD	AFR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02717	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0228	GWD	AFR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02717	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0133	GWD	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02717	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0068	GWD	AFR	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	HG02717	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0118	GWD	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02717	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0079	GWD	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02717	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	GWD	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02717	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	GWD	AFR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG02717	hp1	a0006	a0006c0013	a0006c0013t0001	a0006c0013t0001g0350	GWD	AFR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02717	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0053	GWD	AFR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02717	hp1	a0002	a0002c0002	a0002c0002t0010	a0002c0002t0010g0004	GWD	AFR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02717	hp2	a0001	a0001c0001	a0001c0001t0017	a0001c0001t0017g0029	GWD	AFR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02717	hp1	a0011	a0011c0023	a0011c0023t0043	a0011c0023t0043g0047	GWD	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02717	hp2	a0004	a0004c0007	a0004c0007t0015	a0004c0007t0015g0105	GWD	AFR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02717	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0131	GWD	AFR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02717	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0062	GWD	AFR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG02717	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0113	GWD	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02717	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0016	GWD	AFR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02717	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0197	GWD	AFR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02717	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0097	GWD	AFR	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	HG02717	hp1	a0002	a0002c0002	a0002c0002t0059	a0002c0002t0059g0032	GWD	AFR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02717	hp2	a0001	a0001c0001	a0001c0001t0063	a0001c0001t0063g0288	GWD	AFR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG02717	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0227	GWD	AFR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02717	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0077	GWD	AFR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02717	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	GWD	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02717	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	GWD	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02717	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GWD	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02717	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GWD	AFR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02717	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0005	GWD	AFR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02717	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0161	GWD	AFR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02717	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0003	GWD	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02717	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0003	GWD	AFR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02717	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0310	GWD	AFR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02717	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0001	GWD	AFR	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	HG02717	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0008	GWD	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02717	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0045	GWD	AFR	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	HG02717	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0329	GWD	AFR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02717	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0263	GWD	AFR	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	HG02717	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0242	GWD	AFR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02717	hp2	a0005	a0005c0021	a0005c0021t0001	a0005c0021t0001g0206	GWD	AFR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG02717	hp1	a0002	a0002c0007	a0002c0007t0007	a0002c0007t0007g0341	GWD	AFR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02717	hp2	a0002	a0002c0007	a0002c0007t0011	a0002c0007t0011g0004	GWD	AFR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG02717	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0129	GWD	AFR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG02717	hp2	a0007	a0007c0008	a0007c0008t0007	a0007c0008t0007g0338	GWD	AFR	ABCA10	chr17	69143007	69233824