Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG03540	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	GWD	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG03540	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0016	GWD	AFR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG03540	hp1	a0001	a0001c0001	a0001c0001t0015	a0001c0001t0015g0096	GWD	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG03540	hp2	a0002	a0002c0004	a0002c0004t0018	a0002c0004t0018g0153	GWD	AFR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG03540	hp1	a0019	a0019c0027	a0019c0027t0002	a0019c0027t0002g0012	GWD	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG03540	hp2	a0031	a0031c0048	a0031c0048t0002	a0031c0048t0002g0019	GWD	AFR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG03540	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0242	GWD	AFR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG03540	hp2	a0001	a0001c0009	a0001c0009t0002	a0001c0009t0002g0082	GWD	AFR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG03540	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0258	GWD	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG03540	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0216	GWD	AFR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG03540	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0351	GWD	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG03540	hp2	a0004	a0004c0005	a0004c0005t0010	a0004c0005t0010g0281	GWD	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG03540	hp1	a0001	a0001c0003	a0001c0003t0005	a0001c0003t0005g0016	GWD	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG03540	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0186	GWD	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG03540	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0137	GWD	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG03540	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0023	GWD	AFR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG03540	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0124	GWD	AFR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG03540	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0097	GWD	AFR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG03540	hp1	a0001	a0001c0001	a0001c0001t0066	a0001c0001t0066g0016	GWD	AFR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG03540	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0032	GWD	AFR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG03540	hp1	a0004	a0004c0010	a0004c0010t0025	a0004c0010t0025g0056	GWD	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG03540	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0002	GWD	AFR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG03540	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0133	GWD	AFR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG03540	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0260	GWD	AFR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG03540	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	GWD	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG03540	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0085	GWD	AFR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG03540	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	GWD	AFR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG03540	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	GWD	AFR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG03540	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0064	GWD	AFR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG03540	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0296	GWD	AFR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG03540	hp1	a0010	a0010c0023	a0010c0023t0008	a0010c0023t0008g0083	GWD	AFR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG03540	hp2	a0001	a0001c0004	a0001c0004t0017	a0001c0004t0017g0075	GWD	AFR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG03540	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0071	GWD	AFR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG03540	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0006	GWD	AFR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG03540	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0007	GWD	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG03540	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	GWD	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG03540	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	GWD	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG03540	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GWD	AFR	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG03540	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0005	GWD	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG03540	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0003	GWD	AFR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG03540	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0050	GWD	AFR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG03540	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0001	GWD	AFR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG03540	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0095	GWD	AFR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG03540	hp2	a0002	a0002c0003	a0002c0003t0004	a0002c0003t0004g0080	GWD	AFR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG03540	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0021	GWD	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG03540	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0123	GWD	AFR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG03540	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0095	GWD	AFR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG03540	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0021	GWD	AFR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG03540	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	GWD	AFR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG03540	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0212	GWD	AFR	AASDH	chr4	56333290	56392491