Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01255	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CLM	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01255	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CLM	AMR	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG01255	hp1	a0003	a0003c0010	a0003c0010t0003	a0003c0010t0003g0088	CLM	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01255	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0102	CLM	AMR	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	HG01255	hp1	a0003	a0003c0003	a0003c0003t0000	a0003c0003t0000g0099	CLM	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01255	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0219	CLM	AMR	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	HG01255	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	CLM	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01255	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0004	CLM	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01255	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0116	CLM	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01255	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	HG01255	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01255	hp2	a0001	a0001c0001	a0001c0001t0046	a0001c0001t0046g0075	CLM	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01255	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	CLM	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01255	hp2	a0004	a0004c0007	a0004c0007t0004	a0004c0007t0004g0042	CLM	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG01255	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0111	CLM	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG01255	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0110	CLM	AMR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG01255	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	CLM	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01255	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0070	CLM	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01255	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0116	CLM	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01255	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0016	CLM	AMR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG01255	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0033	CLM	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01255	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0191	CLM	AMR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG01255	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0081	CLM	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01255	hp2	a0002	a0002c0002	a0002c0002t0053	a0002c0002t0053g0056	CLM	AMR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG01255	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0265	CLM	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01255	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0143	CLM	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01255	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01255	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01255	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01255	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01255	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	CLM	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01255	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0001	CLM	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG01255	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01255	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01255	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0104	CLM	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01255	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0172	CLM	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01255	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01255	hp2	a0002	a0002c0003	a0002c0003t0004	a0002c0003t0004g0010	CLM	AMR	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	HG01255	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	CLM	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01255	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	CLM	AMR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG01255	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0327	CLM	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG01255	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0083	CLM	AMR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG01255	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0006	CLM	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01255	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0115	CLM	AMR	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG01255	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0022	CLM	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01255	hp2	a0012	a0012c0016	a0012c0016t0001	a0012c0016t0001g0184	CLM	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01255	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0325	CLM	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01255	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0230	CLM	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG01255	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0258	CLM	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01255	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0117	CLM	AMR	ABCA10	chr17	69143007	69233824