Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01934	hp1	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0072	PEL	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01934	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0037	PEL	AMR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG01934	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0017	PEL	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG01934	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PEL	AMR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG01934	hp1	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0010	PEL	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01934	hp2	a0011	a0011c0016	a0011c0016t0006	a0011c0016t0006g0108	PEL	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG01934	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0126	PEL	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01934	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	PEL	AMR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG01934	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0091	PEL	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01934	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0242	PEL	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01934	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0234	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01934	hp2	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0201	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01934	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PEL	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01934	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PEL	AMR	A4GNT	chr3	138118713	138137390
AADACL4_chr1_12639085_12672076	HG01934	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	PEL	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG01934	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0094	PEL	AMR	AADACL4	chr1	12639085	12672076
AAGAB_chr15_67195667_67259661	HG01934	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0311	PEL	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01934	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0207	PEL	AMR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG01934	hp1	a0002	a0002c0002	a0002c0002t0127	a0002c0002t0127g0249	PEL	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01934	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0217	PEL	AMR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG01934	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0368	PEL	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01934	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0290	PEL	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01934	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01934	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01934	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01934	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01934	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0139	PEL	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01934	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	PEL	AMR	AAR2	chr20	36231478	36261933
AARS2_chr6_44293731_44318347	HG01934	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0039	PEL	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01934	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0004	PEL	AMR	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	HG01934	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PEL	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01934	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0004	PEL	AMR	AASDHPPT	chr11	106072662	106103695
AATK_chr17_81112295_81171221	HG01934	hp1	a0026	a0026c0046	a0026c0046t0002	a0026c0046t0002g0298	PEL	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01934	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0003	PEL	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01934	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0138	PEL	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01934	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0069	PEL	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG01934	hp1	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0236	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01934	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0299	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG01934	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0092	PEL	AMR	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG01934	hp2	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0135	PEL	AMR	ABCA12	chr2	214926542	215143626
ABCA1_chr9_104776006_104933155	HG01934	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0082	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG01934	hp2	a0010	a0010c0007	a0010c0007t0002	a0010c0007t0002g0013	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG01934	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0112	PEL	AMR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG01934	hp2	a0006	a0006c0045	a0006c0045t0002	a0006c0045t0002g0100	PEL	AMR	ABCA2	chr9	137002234	137033237
ABCA5_chr17_69239311_69332133	HG01934	hp1	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0005	PEL	AMR	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	HG01934	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0299	PEL	AMR	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	HG01934	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0257	PEL	AMR	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	HG01934	hp2	a0004	a0004c0004	a0004c0004t0002	a0004c0004t0002g0146	PEL	AMR	ABCA6	chr17	69073702	69146895
ABCA9_chr17_68969488_69065927	HG01934	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0242	PEL	AMR	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	HG01934	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0082	PEL	AMR	ABCA9	chr17	68969488	69065927