Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2M_chr12_9062708_9120919	HG01070	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	PUR	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01070	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0014	PUR	AMR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG01070	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0026	PUR	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01070	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0072	PUR	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01070	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0291	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01070	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0079	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	PUR	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0133	PUR	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01070	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0164	PUR	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	PUR	AMR	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	HG01070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01070	hp2	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0129	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01070	hp1	a0004	a0004c0007	a0004c0007t0004	a0004c0007t0004g0042	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG01070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG01070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	PUR	AMR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG01070	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	PUR	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01070	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0094	PUR	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0036	PUR	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0200	PUR	AMR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG01070	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0051	PUR	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01070	hp2	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0012	PUR	AMR	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG01070	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0242	PUR	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0135	PUR	AMR	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	HG01070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0167	PUR	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	PUR	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG01070	hp1	a0004	a0004c0006	a0004c0006t0001	a0004c0006t0001g0001	PUR	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0135	PUR	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01070	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0230	PUR	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01070	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0006	PUR	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG01070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0128	PUR	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01070	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	PUR	AMR	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	HG01070	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0010	PUR	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG01070	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0284	PUR	AMR	AASDH	chr4	56333290	56392491
AATF_chr17_36943954_37061871	HG01070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0202	PUR	AMR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG01070	hp2	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0126	PUR	AMR	AATF	chr17	36943954	37061871
ABCA10_chr17_69143007_69233824	HG01070	hp1	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0208	PUR	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01070	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0145	PUR	AMR	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG01070	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0035	PUR	AMR	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG01070	hp2	a0009	a0009c0026	a0009c0026t0003	a0009c0026t0003g0056	PUR	AMR	ABCA12	chr2	214926542	215143626
ABCA13_chr7_48166458_48652497	HG01070	hp1	a0016	a0016c0095	a0016c0095t0002	a0016c0095t0002g0043	PUR	AMR	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	HG01070	hp2	a0003	a0003c0003	a0003c0003t0004	a0003c0003t0004g0034	PUR	AMR	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	HG01070	hp1	a0009	a0009c0028	a0009c0028t0009	a0009c0028t0009g0092	PUR	AMR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG01070	hp2	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0085	PUR	AMR	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG01070	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0065	PUR	AMR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG01070	hp2	a0001	a0001c0005	a0001c0005t0002	a0001c0005t0002g0006	PUR	AMR	ABCA2	chr9	137002234	137033237