Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02165	hp1	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0074	CDX	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02165	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	CDX	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG02165	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0179	CDX	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02165	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0241	CDX	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	HG02165	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0227	CDX	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02165	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	CDX	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02165	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0108	CDX	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02165	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0153	CDX	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02165	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	CDX	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02165	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0005	CDX	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02165	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CDX	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02165	hp2	a0003	a0003c0009	a0003c0009t0001	a0003c0009t0001g0189	CDX	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG02165	hp1	a0001	a0001c0004	a0001c0004t0004	a0001c0004t0004g0167	CDX	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02165	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0071	CDX	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02165	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CDX	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02165	hp2	a0001	a0001c0001	a0001c0001t0021	a0001c0001t0021g0002	CDX	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02165	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0128	CDX	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02165	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	CDX	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02165	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0171	CDX	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02165	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CDX	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG02165	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0020	CDX	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02165	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	CDX	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	HG02165	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0346	CDX	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02165	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0106	CDX	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG02165	hp1	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0248	CDX	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02165	hp2	a0001	a0001c0001	a0001c0001t0032	a0001c0001t0032g0175	CDX	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG02165	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0336	CDX	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02165	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0182	CDX	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02165	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CDX	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02165	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CDX	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02165	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CDX	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02165	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CDX	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG02165	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	CDX	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02165	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CDX	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02165	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0331	CDX	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02165	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0081	CDX	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG02165	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0094	CDX	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02165	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	CDX	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG02165	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0102	CDX	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02165	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CDX	EAS	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	HG02165	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0086	CDX	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02165	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0187	CDX	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG02165	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0134	CDX	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02165	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0014	CDX	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG02165	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0071	CDX	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02165	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0178	CDX	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG02165	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0315	CDX	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02165	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0155	CDX	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG02165	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0020	CDX	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG02165	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0285	CDX	EAS	ABCA10	chr17	69143007	69233824