Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG00544	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0079	CHS	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG00544	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG00544	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0195	CHS	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG00544	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0119	CHS	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG00544	hp1	a0007	a0007c0013	a0007c0013t0001	a0007c0013t0001g0211	CHS	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG00544	hp2	a0002	a0002c0017	a0002c0017t0003	a0002c0017t0003g0233	CHS	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG00544	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0157	CHS	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG00544	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0270	CHS	EAS	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	HG00544	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0161	CHS	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG00544	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0175	CHS	EAS	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	HG00544	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0096	CHS	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG00544	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	CHS	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG00544	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0248	CHS	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG00544	hp2	a0001	a0001c0004	a0001c0004t0004	a0001c0004t0004g0249	CHS	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG00544	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0106	CHS	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG00544	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG00544	hp1	a0002	a0002c0020	a0002c0020t0002	a0002c0020t0002g0020	CHS	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG00544	hp2	a0003	a0003c0005	a0003c0005t0004	a0003c0005t0004g0112	CHS	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG00544	hp1	a0005	a0005c0008	a0005c0008t0002	a0005c0008t0002g0002	CHS	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG00544	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0114	CHS	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	HG00544	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0292	CHS	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG00544	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0136	CHS	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG00544	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0221	CHS	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG00544	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0034	CHS	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG00544	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0119	CHS	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG00544	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0300	CHS	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG00544	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CHS	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG00544	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG00544	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG00544	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG00544	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0082	CHS	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG00544	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG00544	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	CHS	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG00544	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	CHS	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	HG00544	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	CHS	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG00544	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	CHS	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG00544	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG00544	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0058	CHS	EAS	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	HG00544	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0309	CHS	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG00544	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG00544	hp1	a0003	a0003c0004	a0003c0004t0001	a0003c0004t0001g0136	CHS	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG00544	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	CHS	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG00544	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0180	CHS	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG00544	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0148	CHS	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG00544	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	CHS	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG00544	hp2	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0039	CHS	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG00544	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0163	CHS	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG00544	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0221	CHS	EAS	ABAT	chr16	8669617	8789570
ABCA13_chr7_48166458_48652497	HG00544	hp1	a0018	a0018c0029	a0018c0029t0001	a0018c0029t0001g0134	CHS	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	HG00544	hp2	a0053	a0053c0051	a0053c0051t0001	a0053c0051t0001g0026	CHS	EAS	ABCA13	chr7	48166458	48652497