Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18939	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18939	hp2	a0001	a0001c0010	a0001c0010t0001	a0001c0010t0001g0062	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA18939	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0196	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18939	hp2	a0001	a0001c0003	a0001c0003t0047	a0001c0003t0047g0219	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18939	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0308	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18939	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0354	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA18939	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0191	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18939	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0002	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18939	hp1	a0001	a0001c0002	a0001c0002t0006	a0001c0002t0006g0222	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18939	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0017	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18939	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0008	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18939	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0150	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA18939	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0325	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18939	hp2	a0008	a0008c0023	a0008c0023t0003	a0008c0023t0003g0119	JPT	EAS	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	NA18939	hp1	a0001	a0001c0001	a0001c0001t0022	a0001c0001t0022g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18939	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0030	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18939	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0104	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18939	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	AADACL4	chr1	12639085	12672076
AAGAB_chr15_67195667_67259661	NA18939	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0209	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18939	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18939	hp1	a0001	a0001c0003	a0001c0003t0109	a0001c0003t0109g0166	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18939	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0252	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA18939	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0314	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18939	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0060	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18939	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18939	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18939	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18939	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18939	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0063	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18939	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0117	JPT	EAS	AAR2	chr20	36231478	36261933
AARS1_chr16_70247298_70294506	NA18939	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0280	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18939	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0119	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18939	hp1	a0013	a0013c0021	a0013c0021t0001	a0013c0021t0001g0065	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18939	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18939	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0112	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18939	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA18939	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18939	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0004	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18939	hp1	a0004	a0004c0025	a0004c0025t0001	a0004c0025t0001g0126	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18939	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18939	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0314	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18939	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0099	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA18939	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0211	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18939	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0135	JPT	EAS	AATK	chr17	81112295	81171221
ABCA2_chr9_137002234_137033237	NA18939	hp1	a0001	a0001c0053	a0001c0053t0001	a0001c0053t0001g0056	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18939	hp2	a0011	a0011c0034	a0011c0034t0001	a0011c0034t0001g0124	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA8_chr17_68862289_68960392	NA18939	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0215	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18939	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0271	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA9_chr17_68969488_69065927	NA18939	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18939	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0223	JPT	EAS	ABCA9	chr17	68969488	69065927