Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18943	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18943	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	NA18943	hp1	a0007	a0007c0013	a0007c0013t0001	a0007c0013t0001g0319	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18943	hp2	a0007	a0007c0062	a0007c0062t0002	a0007c0062t0002g0356	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18943	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0225	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18943	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0249	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18943	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0004	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18943	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0199	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18943	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0008	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18943	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0074	JPT	EAS	A4GALT	chr22	42687121	42725870
AACS_chr12_125060435_125148316	NA18943	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0165	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18943	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0345	JPT	EAS	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	NA18943	hp1	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0004	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18943	hp2	a0008	a0008c0016	a0008c0016t0021	a0008c0016t0021g0002	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18943	hp1	a0002	a0002c0007	a0002c0007t0001	a0002c0007t0001g0015	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18943	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0148	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAT_chr4_170055222_170094956	NA18943	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18943	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18943	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0112	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18943	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0167	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18943	hp1	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0201	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18943	hp2	a0002	a0002c0002	a0002c0002t0133	a0002c0002t0133g0210	JPT	EAS	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	NA18943	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18943	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18943	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18943	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0011	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18943	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18943	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0021	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18943	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18943	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0010	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18943	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0121	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18943	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0270	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18943	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18943	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18943	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0004	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18943	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0009	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	NA18943	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0009	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18943	hp2	a0001	a0001c0001	a0001c0001t0017	a0001c0001t0017g0296	JPT	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA18943	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0208	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA18943	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0145	JPT	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	NA18943	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0177	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18943	hp2	a0003	a0003c0007	a0003c0007t0001	a0003c0007t0001g0276	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18943	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0145	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18943	hp2	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0181	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA18943	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0292	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18943	hp2	a0011	a0011c0012	a0011c0012t0008	a0011c0012t0008g0329	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA4_chr1_93987834_94126148	NA18943	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0180	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18943	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0282	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCB11_chr2_168915781_169036324	NA18943	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0124	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA18943	hp2	a0001	a0001c0006	a0001c0006t0034	a0001c0006t0034g0114	JPT	EAS	ABCB11	chr2	168915781	169036324