Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18945	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18945	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA18945	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0222	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18945	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0013	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18945	hp1	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0267	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18945	hp2	a0001	a0001c0008	a0001c0008t0002	a0001c0008t0002g0255	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA18945	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18945	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0208	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18945	hp1	a0003	a0003c0004	a0003c0004t0006	a0003c0004t0006g0226	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18945	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0237	JPT	EAS	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	NA18945	hp1	a0001	a0001c0006	a0001c0006t0001	a0001c0006t0001g0017	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18945	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0182	JPT	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	NA18945	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18945	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0009	JPT	EAS	AADACL2	chr3	151728927	151766339
AADAT_chr4_170055222_170094956	NA18945	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18945	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18945	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0005	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18945	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0160	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18945	hp1	a0002	a0002c0002	a0002c0002t0062	a0002c0002t0062g0054	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18945	hp2	a0001	a0001c0001	a0001c0001t0126	a0001c0001t0126g0219	JPT	EAS	AAK1	chr2	69452997	69648739
AARD_chr8_116933207_116949487	NA18945	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18945	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA18945	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18945	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18945	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18945	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARSD1	chr17	42945526	42969454
AASS_chr7_122068549_122149249	NA18945	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0083	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18945	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0184	JPT	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA18945	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA18945	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0223	JPT	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	NA18945	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0145	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18945	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0034	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18945	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0248	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18945	hp2	a0001	a0001c0022	a0001c0022t0002	a0001c0022t0002g0262	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA18945	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0295	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18945	hp2	a0004	a0004c0006	a0004c0006t0003	a0004c0006t0003g0121	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA2_chr9_137002234_137033237	NA18945	hp1	a0001	a0001c0009	a0001c0009t0001	a0001c0009t0001g0018	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18945	hp2	a0001	a0001c0019	a0001c0019t0001	a0001c0019t0001g0040	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA5_chr17_69239311_69332133	NA18945	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0284	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18945	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0146	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA18945	hp1	a0004	a0004c0004	a0004c0004t0002	a0004c0004t0002g0019	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18945	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0222	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCB11_chr2_168915781_169036324	NA18945	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0175	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA18945	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0252	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB5_chr7_20610667_20762008	NA18945	hp1	a0003	a0003c0002	a0003c0002t0001	a0003c0002t0001g0312	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA18945	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0152	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB7_chrX_75046048_75161283	NA18945	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCC10_chr6_43422541_43455427	NA18945	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC10_chr6_43422541_43455427	NA18945	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0086	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC2_chr10_99777640_99857594	NA18945	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0226	JPT	EAS	ABCC2	chr10	99777640	99857594