Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA18960	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0152	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18960	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0120	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18960	hp1	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0259	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18960	hp2	a0002	a0002c0007	a0002c0007t0003	a0002c0007t0003g0268	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18960	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0154	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18960	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0275	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18960	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0016	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18960	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0005	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18960	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0135	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18960	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0320	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18960	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0026	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18960	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA18960	hp1	a0001	a0001c0001	a0001c0001t0015	a0001c0001t0015g0006	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18960	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0030	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18960	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0010	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18960	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18960	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18960	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0174	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18960	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0102	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18960	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA18960	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0020	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18960	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0228	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18960	hp1	a0001	a0001c0001	a0001c0001t0114	a0001c0001t0114g0171	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18960	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0238	JPT	EAS	AAK1	chr2	69452997	69648739
AANAT_chr17_76462603_76475117	NA18960	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18960	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA18960	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18960	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18960	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18960	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0286	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18960	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18960	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18960	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18960	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18960	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0120	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18960	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0149	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18960	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0186	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18960	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0072	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA18960	hp1	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0131	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18960	hp2	a0003	a0003c0007	a0003c0007t0001	a0003c0007t0001g0271	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18960	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0170	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18960	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0092	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA18960	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0043	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18960	hp2	a0011	a0011c0012	a0011c0012t0008	a0011c0012t0008g0325	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	NA18960	hp1	a0008	a0008c0006	a0008c0006t0005	a0008c0006t0005g0063	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18960	hp2	a0001	a0001c0005	a0001c0005t0002	a0001c0005t0002g0062	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	NA18960	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0137	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18960	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0098	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	NA18960	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0021	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA18960	hp2	a0001	a0001c0020	a0001c0020t0001	a0001c0020t0001g0075	JPT	EAS	ABCA3	chr16	2270881	2345728