Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18986	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18986	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA18986	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0099	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18986	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0028	JPT	EAS	A1CF	chr10	50794409	50890627
A3GALT2_chr1_33301766_33326098	NA18986	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0043	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18986	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18986	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0127	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18986	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0118	JPT	EAS	A4GALT	chr22	42687121	42725870
AACS_chr12_125060435_125148316	NA18986	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0222	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18986	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0289	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18986	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18986	hp2	a0002	a0002c0002	a0002c0002t0011	a0002c0002t0011g0005	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18986	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0123	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18986	hp2	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0004	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA18986	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0058	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18986	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18986	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0118	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18986	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0039	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18986	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0220	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18986	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0122	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18986	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0234	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18986	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0003	JPT	EAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	NA18986	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18986	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18986	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0156	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18986	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0099	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18986	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18986	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA18986	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18986	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18986	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0013	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18986	hp2	a0001	a0001c0001	a0001c0001t0021	a0001c0001t0021g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18986	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0134	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18986	hp2	a0008	a0008c0011	a0008c0011t0002	a0008c0011t0002g0205	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18986	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0041	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18986	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0075	JPT	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA18986	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0127	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA18986	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0051	JPT	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	NA18986	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0209	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18986	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0273	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18986	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0113	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18986	hp2	a0002	a0002c0005	a0002c0005t0001	a0002c0005t0001g0214	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA13_chr7_48166458_48652497	NA18986	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0058	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA18986	hp2	a0006	a0006c0023	a0006c0023t0003	a0006c0023t0003g0171	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA2_chr9_137002234_137033237	NA18986	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18986	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0051	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA4_chr1_93987834_94126148	NA18986	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0196	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18986	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0195	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA8_chr17_68862289_68960392	NA18986	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0248	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18986	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0216	JPT	EAS	ABCA8	chr17	68862289	68960392