Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA19066	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0147	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19066	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0283	JPT	EAS	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	NA19066	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0066	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19066	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0102	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA19066	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0004	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19066	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA19066	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0145	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19066	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19066	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0014	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19066	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0004	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA19066	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0315	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19066	hp2	a0002	a0002c0026	a0002c0026t0001	a0002c0026t0001g0145	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA19066	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0137	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19066	hp2	a0002	a0002c0002	a0002c0002t0026	a0002c0002t0026g0048	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19066	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0011	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19066	hp2	a0006	a0006c0035	a0006c0035t0011	a0006c0035t0011g0024	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA19066	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0157	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA19066	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0074	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA19066	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19066	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA19066	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19066	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA19066	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0314	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19066	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0178	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA19066	hp1	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0256	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19066	hp2	a0001	a0001c0001	a0001c0001t0075	a0001c0001t0075g0020	JPT	EAS	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	NA19066	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19066	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19066	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19066	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19066	hp1	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0008	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19066	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0006	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA19066	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19066	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AASDH_chr4_56333290_56392491	NA19066	hp1	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0231	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19066	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0154	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19066	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0253	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19066	hp2	a0001	a0001c0001	a0001c0001t0026	a0001c0001t0026g0226	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA19066	hp1	a0003	a0003c0007	a0003c0007t0001	a0003c0007t0001g0286	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19066	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0161	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA19066	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0125	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19066	hp2	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0196	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA19066	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0023	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19066	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0176	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	NA19066	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0117	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	NA19066	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0058	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA1_chr9_104776006_104933155	NA19066	hp1	a0013	a0013c0013	a0013c0013t0003	a0013c0013t0003g0120	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA19066	hp2	a0006	a0006c0004	a0006c0004t0005	a0006c0004t0005g0206	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	NA19066	hp1	a0001	a0001c0012	a0001c0012t0001	a0001c0012t0001g0016	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA19066	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0170	JPT	EAS	ABCA2	chr9	137002234	137033237