Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA19079	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0008	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19079	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0176	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA19079	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0353	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19079	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0131	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA19079	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0158	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19079	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0011	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA19079	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0210	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19079	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0187	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19079	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19079	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0004	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA19079	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0316	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19079	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0338	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA19079	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19079	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL4_chr1_12639085_12672076	NA19079	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0216	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA19079	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0213	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA19079	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0080	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19079	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0008	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA19079	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0049	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19079	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA19079	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0093	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19079	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0306	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA19079	hp1	a0001	a0001c0001	a0001c0001t0137	a0001c0001t0137g0247	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19079	hp2	a0002	a0002c0002	a0002c0002t0019	a0002c0002t0019g0143	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA19079	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0194	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19079	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0327	JPT	EAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	NA19079	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19079	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA19079	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0001	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA19079	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA19079	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19079	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0005	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA19079	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0138	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19079	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0197	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA19079	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19079	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA19079	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0113	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA19079	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA19079	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19079	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19079	hp1	a0001	a0001c0005	a0001c0005t0005	a0001c0005t0005g0030	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19079	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0077	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19079	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0006	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19079	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0178	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA19079	hp1	a0007	a0007c0008	a0007c0008t0001	a0007c0008t0001g0215	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19079	hp2	a0004	a0004c0005	a0004c0005t0001	a0004c0005t0001g0015	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA19079	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0094	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19079	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0263	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA19079	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0179	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19079	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0279	JPT	EAS	ABCA10	chr17	69143007	69233824