Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA19080	hp1	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0002	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19080	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0013	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA19080	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0286	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19080	hp2	a0001	a0001c0008	a0001c0008t0001	a0001c0008t0001g0004	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA19080	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0004	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0216	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA19080	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0235	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19080	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0037	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA19080	hp1	a0003	a0003c0004	a0003c0004t0006	a0003c0004t0006g0227	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19080	hp2	a0001	a0001c0002	a0001c0002t0006	a0001c0002t0006g0168	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0163	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19080	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0005	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA19080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0117	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA19080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA19080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0327	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19080	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0179	JPT	EAS	AACS	chr12	125060435	125148316
AADAC_chr3_151809116_151833488	NA19080	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0008	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA19080	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0218	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19080	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0091	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA19080	hp1	a0001	a0001c0001	a0001c0001t0031	a0001c0001t0031g0176	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19080	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0265	JPT	EAS	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	NA19080	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0024	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19080	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA19080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19080	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA19080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA19080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0031	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA19080	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19080	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0221	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0073	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19080	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0008	JPT	EAS	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	NA19080	hp1	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0032	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0090	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA1_chr9_104776006_104933155	NA19080	hp1	a0001	a0001c0005	a0001c0005t0002	a0001c0005t0002g0254	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA19080	hp2	a0031	a0031c0067	a0031c0067t0006	a0031c0067t0006g0223	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA8_chr17_68862289_68960392	NA19080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0251	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA19080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0208	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA9_chr17_68969488_69065927	NA19080	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0152	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0188	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB8_chr7_151023450_151052782	NA19080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA19080	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0035	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCC2_chr10_99777640_99857594	NA19080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0188	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC2_chr10_99777640_99857594	NA19080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0289	JPT	EAS	ABCC2	chr10	99777640	99857594