Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA19082	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0188	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19082	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0284	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA19082	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0141	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19082	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0008	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA19082	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19082	hp2	a0006	a0006c0008	a0006c0008t0001	a0006c0008t0001g0217	JPT	EAS	A2M	chr12	9062708	9120919
AACS_chr12_125060435_125148316	NA19082	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0234	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19082	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0307	JPT	EAS	AACS	chr12	125060435	125148316
AADAT_chr4_170055222_170094956	NA19082	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0163	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19082	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA19082	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0343	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19082	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0208	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA19082	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0316	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19082	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0123	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA19082	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19082	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AARD_chr8_116933207_116949487	NA19082	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19082	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA19082	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0133	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19082	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0360	JPT	EAS	AARS1	chr16	70247298	70294506
AASDHPPT_chr11_106072662_106103695	NA19082	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19082	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0013	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19082	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0310	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19082	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19082	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0025	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19082	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0120	JPT	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA19082	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0150	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA19082	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0061	JPT	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	NA19082	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0259	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19082	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0163	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA19082	hp1	a0001	a0001c0003	a0001c0003t0044	a0001c0003t0044g0261	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19082	hp2	a0002	a0002c0005	a0002c0005t0004	a0002c0005t0004g0194	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA19082	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0013	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19082	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0029	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	NA19082	hp1	a0003	a0003c0002	a0003c0002t0002	a0003c0002t0002g0122	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA19082	hp2	a0007	a0007c0090	a0007c0090t0007	a0007c0090t0007g0046	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA6_chr17_69073702_69146895	NA19082	hp1	a0002	a0002c0019	a0002c0019t0002	a0002c0019t0002g0188	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19082	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA9_chr17_68969488_69065927	NA19082	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0159	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19082	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0237	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB10_chr1_229511582_229563707	NA19082	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0101	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA19082	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0177	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB1_chr7_87498017_87605884	NA19082	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0158	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA19082	hp2	a0003	a0003c0004	a0003c0004t0005	a0003c0004t0005g0011	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB5_chr7_20610667_20762008	NA19082	hp1	a0003	a0003c0002	a0003c0002t0001	a0003c0002t0001g0198	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA19082	hp2	a0002	a0002c0014	a0002c0014t0001	a0002c0014t0001g0235	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB7_chrX_75046048_75161283	NA19082	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0198	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCB9_chr12_122923992_122971463	NA19082	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0153	JPT	EAS	ABCB9	chr12	122923992	122971463
ABCB9_chr12_122923992_122971463	NA19082	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0199	JPT	EAS	ABCB9	chr12	122923992	122971463
ABCC10_chr6_43422541_43455427	NA19082	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	ABCC10	chr6	43422541	43455427