JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02040	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	KHV	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02040	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG02040	hp1	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0067	KHV	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02040	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0151	KHV	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG02040	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0210	KHV	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02040	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	KHV	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02040	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0013	KHV	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02040	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0004	KHV	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02040	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0314	KHV	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02040	hp2	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0123	KHV	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02040	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0005	KHV	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02040	hp2	a0006	a0006c0010	a0006c0010t0002	a0006c0010t0002g0042	KHV	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	HG02040	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0037	KHV	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02040	hp2	a0001	a0001c0004	a0001c0004t0004	a0001c0004t0004g0241	KHV	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02040	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02040	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0046	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02040	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02040	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0114	KHV	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02040	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	KHV	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02040	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AADACL4	chr1	12639085	12672076
AAGAB_chr15_67195667_67259661	HG02040	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0117	KHV	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02040	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0132	KHV	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG02040	hp1	a0001	a0001c0001	a0001c0001t0024	a0001c0001t0024g0090	KHV	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02040	hp2	a0001	a0001c0008	a0001c0008t0135	a0001c0008t0135g0262	KHV	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG02040	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0341	KHV	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02040	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0175	KHV	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02040	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	KHV	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02040	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	KHV	EAS	AAMP	chr2	218259129	218275137
AAR2_chr20_36231478_36261933	HG02040	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	KHV	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02040	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0051	KHV	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02040	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02040	hp2	a0003	a0003c0003	a0003c0003t0013	a0003c0003t0013g0008	KHV	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02040	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	KHV	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02040	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0109	KHV	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG02040	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	KHV	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02040	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AARS2	chr6	44293731	44318347
AASDH_chr4_56333290_56392491	HG02040	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0050	KHV	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02040	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0186	KHV	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG02040	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0192	KHV	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02040	hp2	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0098	KHV	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG02040	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0192	KHV	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG02040	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0147	KHV	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG02040	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0032	KHV	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02040	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0176	KHV	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG02040	hp1	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0068	KHV	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02040	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0109	KHV	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG02040	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0153	KHV	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG02040	hp2	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0243	KHV	EAS	ABCA10	chr17	69143007	69233824
ABCA3_chr16_2270881_2345728	HG02040	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0142	KHV	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG02040	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0091	KHV	EAS	ABCA3	chr16	2270881	2345728