JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02080	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	KHV	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG02080	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0162	KHV	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02080	hp2	a0001	a0001c0001	a0001c0001t0025	a0001c0001t0025g0123	KHV	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02080	hp1	a0002	a0002c0003	a0002c0003t0002	a0002c0003t0002g0109	KHV	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02080	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0214	KHV	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	HG02080	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0120	KHV	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02080	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0251	KHV	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02080	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0162	KHV	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02080	hp2	a0001	a0001c0002	a0001c0002t0015	a0001c0002t0015g0018	KHV	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02080	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	KHV	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0178	KHV	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	KHV	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0115	KHV	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG02080	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0236	KHV	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	KHV	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02080	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0078	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02080	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0008	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02080	hp2	a0001	a0001c0001	a0001c0001t0022	a0001c0001t0022g0001	KHV	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	KHV	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0087	KHV	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG02080	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0017	KHV	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02080	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0109	KHV	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	KHV	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	KHV	EAS	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	HG02080	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0099	KHV	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02080	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0029	KHV	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG02080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0303	KHV	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02080	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0036	KHV	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	KHV	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG02080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	KHV	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02080	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0032	KHV	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02080	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0208	KHV	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG02080	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	KHV	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	HG02080	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0004	KHV	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG02080	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0233	KHV	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02080	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0135	KHV	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG02080	hp1	a0003	a0003c0004	a0003c0004t0001	a0003c0004t0001g0139	KHV	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02080	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0228	KHV	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG02080	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	KHV	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG02080	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0197	KHV	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG02080	hp1	a0012	a0012c0016	a0012c0016t0001	a0012c0016t0001g0170	KHV	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02080	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0043	KHV	EAS	AATK	chr17	81112295	81171221