Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01515	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	IBS	EUR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01515	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	IBS	EUR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG01515	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0102	IBS	EUR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG01515	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0015	IBS	EUR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG01515	hp1	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0101	IBS	EUR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01515	hp2	a0005	a0005c0009	a0005c0009t0001	a0005c0009t0001g0068	IBS	EUR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG01515	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0067	IBS	EUR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01515	hp2	a0004	a0004c0006	a0004c0006t0001	a0004c0006t0001g0199	IBS	EUR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG01515	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0210	IBS	EUR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01515	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0018	IBS	EUR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01515	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0172	IBS	EUR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01515	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0164	IBS	EUR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01515	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	IBS	EUR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01515	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0095	IBS	EUR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01515	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	IBS	EUR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01515	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0120	IBS	EUR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01515	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0273	IBS	EUR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01515	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0192	IBS	EUR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01515	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0008	IBS	EUR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01515	hp2	a0001	a0001c0001	a0001c0001t0018	a0001c0001t0018g0150	IBS	EUR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01515	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	IBS	EUR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01515	hp2	a0002	a0002c0003	a0002c0003t0005	a0002c0003t0005g0005	IBS	EUR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG01515	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	IBS	EUR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01515	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	IBS	EUR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01515	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	IBS	EUR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01515	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	IBS	EUR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG01515	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0036	IBS	EUR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01515	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0174	IBS	EUR	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG01515	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0321	IBS	EUR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01515	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0280	IBS	EUR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01515	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	IBS	EUR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01515	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	IBS	EUR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01515	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	IBS	EUR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01515	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	IBS	EUR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01515	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0160	IBS	EUR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01515	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0108	IBS	EUR	AAR2	chr20	36231478	36261933
AARS1_chr16_70247298_70294506	HG01515	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0328	IBS	EUR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01515	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0080	IBS	EUR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01515	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	IBS	EUR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01515	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0047	IBS	EUR	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	HG01515	hp1	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0002	IBS	EUR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01515	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0004	IBS	EUR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG01515	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0073	IBS	EUR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG01515	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0196	IBS	EUR	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	HG01515	hp1	a0001	a0001c0001	a0001c0001t0016	a0001c0001t0016g0291	IBS	EUR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01515	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0002	IBS	EUR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01515	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0133	IBS	EUR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01515	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0033	IBS	EUR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG01515	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0112	IBS	EUR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01515	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0253	IBS	EUR	ABCA10	chr17	69143007	69233824