Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG03831	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG03831	hp2	a0001	a0001c0001	a0001c0001t0015	a0001c0001t0015g0075	BEB	SAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG03831	hp1	a0001	a0001c0001	a0001c0001t0029	a0001c0001t0029g0057	BEB	SAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG03831	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0282	BEB	SAS	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	HG03831	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0263	BEB	SAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG03831	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0185	BEB	SAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG03831	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0184	BEB	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG03831	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0013	BEB	SAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG03831	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0054	BEB	SAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG03831	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0250	BEB	SAS	A4GALT	chr22	42687121	42725870
AACS_chr12_125060435_125148316	HG03831	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0148	BEB	SAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG03831	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0230	BEB	SAS	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	HG03831	hp1	a0001	a0001c0001	a0001c0001t0028	a0001c0001t0028g0027	BEB	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG03831	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0138	BEB	SAS	AADACL3	chr1	12711110	12733760
AADAT_chr4_170055222_170094956	HG03831	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0100	BEB	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG03831	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0080	BEB	SAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG03831	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0286	BEB	SAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG03831	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0108	BEB	SAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG03831	hp1	a0002	a0002c0002	a0002c0002t0047	a0002c0002t0047g0053	BEB	SAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG03831	hp2	a0001	a0001c0001	a0001c0001t0113	a0001c0001t0113g0178	BEB	SAS	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	HG03831	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0039	BEB	SAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG03831	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	BEB	SAS	AAMP	chr2	218259129	218275137
AAR2_chr20_36231478_36261933	HG03831	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0112	BEB	SAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG03831	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0125	BEB	SAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG03831	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG03831	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0005	BEB	SAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG03831	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0160	BEB	SAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG03831	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0162	BEB	SAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG03831	hp1	a0002	a0002c0006	a0002c0006t0004	a0002c0006t0004g0049	BEB	SAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG03831	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0006	BEB	SAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG03831	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	BEB	SAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG03831	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0034	BEB	SAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG03831	hp1	a0001	a0001c0001	a0001c0001t0022	a0001c0001t0022g0001	BEB	SAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG03831	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	BEB	SAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG03831	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0078	BEB	SAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG03831	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0041	BEB	SAS	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	HG03831	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0098	BEB	SAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG03831	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0243	BEB	SAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG03831	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0156	BEB	SAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG03831	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0359	BEB	SAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG03831	hp1	a0003	a0003c0003	a0003c0003t0005	a0003c0003t0005g0324	BEB	SAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG03831	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0252	BEB	SAS	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	HG03831	hp1	a0004	a0004c0087	a0004c0087t0009	a0004c0087t0009g0118	BEB	SAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG03831	hp2	a0015	a0015c0061	a0015c0061t0001	a0015c0061t0001g0080	BEB	SAS	ABCA1	chr9	104776006	104933155
ABCA3_chr16_2270881_2345728	HG03831	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0092	BEB	SAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG03831	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0052	BEB	SAS	ABCA3	chr16	2270881	2345728
ABCA4_chr1_93987834_94126148	HG03831	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0255	BEB	SAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	HG03831	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0120	BEB	SAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	HG03831	hp1	a0002	a0002c0001	a0002c0001t0022	a0002c0001t0022g0188	BEB	SAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	HG03831	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0223	BEB	SAS	ABCA5	chr17	69239311	69332133