Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA20905	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GIH	SAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA20905	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0061	GIH	SAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA20905	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0127	GIH	SAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA20905	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0087	GIH	SAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA20905	hp1	a0011	a0011c0016	a0011c0016t0006	a0011c0016t0006g0342	GIH	SAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA20905	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0349	GIH	SAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA20905	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0018	GIH	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA20905	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0026	GIH	SAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA20905	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	GIH	SAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA20905	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0180	GIH	SAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA20905	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0111	GIH	SAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA20905	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0089	GIH	SAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA20905	hp1	a0001	a0001c0001	a0001c0001t0020	a0001c0001t0020g0006	GIH	SAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA20905	hp2	a0001	a0001c0001	a0001c0001t0054	a0001c0001t0054g0055	GIH	SAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA20905	hp1	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0019	GIH	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA20905	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	GIH	SAS	AADACL3	chr1	12711110	12733760
AADAT_chr4_170055222_170094956	NA20905	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0162	GIH	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA20905	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0054	GIH	SAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA20905	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0199	GIH	SAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA20905	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0097	GIH	SAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA20905	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0157	GIH	SAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA20905	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0246	GIH	SAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	NA20905	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GIH	SAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA20905	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GIH	SAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA20905	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GIH	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA20905	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GIH	SAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA20905	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0274	GIH	SAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA20905	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	GIH	SAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA20905	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	GIH	SAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA20905	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GIH	SAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA20905	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0069	GIH	SAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA20905	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	GIH	SAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA20905	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0071	GIH	SAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA20905	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0037	GIH	SAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA20905	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0255	GIH	SAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA20905	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0155	GIH	SAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA20905	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0087	GIH	SAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA20905	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0294	GIH	SAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA20905	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0215	GIH	SAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA20905	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0112	GIH	SAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	NA20905	hp1	a0001	a0001c0011	a0001c0011t0001	a0001c0011t0001g0198	GIH	SAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA20905	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0096	GIH	SAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA20905	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0219	GIH	SAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA20905	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0270	GIH	SAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA20905	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0067	GIH	SAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA20905	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0100	GIH	SAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	NA20905	hp1	a0001	a0001c0002	a0001c0002t0022	a0001c0002t0022g0148	GIH	SAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	NA20905	hp2	a0012	a0012c0052	a0012c0052t0001	a0012c0052t0001g0128	GIH	SAS	ABCA12	chr2	214926542	215143626
ABCA13_chr7_48166458_48652497	NA20905	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0178	GIH	SAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA20905	hp2	a0008	a0008c0013	a0008c0013t0005	a0008c0013t0005g0045	GIH	SAS	ABCA13	chr7	48166458	48652497