Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG03654	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0089	PJL	SAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG03654	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0057	PJL	SAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG03654	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0280	PJL	SAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG03654	hp2	a0001	a0001c0002	a0001c0002t0013	a0001c0002t0013g0085	PJL	SAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG03654	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0283	PJL	SAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG03654	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0148	PJL	SAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	HG03654	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0256	PJL	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG03654	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0073	PJL	SAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG03654	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0253	PJL	SAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG03654	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0367	PJL	SAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG03654	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0031	PJL	SAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG03654	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PJL	SAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG03654	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG03654	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	PJL	SAS	AAAS	chr12	53302460	53326610
AADACL3_chr1_12711110_12733760	HG03654	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0011	PJL	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG03654	hp2	a0004	a0004c0007	a0004c0007t0004	a0004c0007t0004g0003	PJL	SAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG03654	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	PJL	SAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG03654	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	PJL	SAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG03654	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0104	PJL	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG03654	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0105	PJL	SAS	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	HG03654	hp1	a0001	a0001c0004	a0001c0004t0153	a0001c0004t0153g0296	PJL	SAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG03654	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0022	PJL	SAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG03654	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0229	PJL	SAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG03654	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0241	PJL	SAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG03654	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG03654	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG03654	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG03654	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG03654	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0021	PJL	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG03654	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PJL	SAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG03654	hp1	a0007	a0007c0015	a0007c0015t0001	a0007c0015t0001g0009	PJL	SAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG03654	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0248	PJL	SAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG03654	hp1	a0001	a0001c0011	a0001c0011t0005	a0001c0011t0005g0036	PJL	SAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG03654	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0009	PJL	SAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG03654	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG03654	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	PJL	SAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG03654	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0106	PJL	SAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG03654	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0080	PJL	SAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG03654	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0216	PJL	SAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG03654	hp2	a0009	a0009c0012	a0009c0012t0001	a0009c0012t0001g0153	PJL	SAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG03654	hp1	a0001	a0001c0001	a0001c0001t0024	a0001c0001t0024g0222	PJL	SAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG03654	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0265	PJL	SAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG03654	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0187	PJL	SAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG03654	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0133	PJL	SAS	AATF	chr17	36943954	37061871
ABAT_chr16_8669617_8789570	HG03654	hp1	a0002	a0002c0005	a0002c0005t0041	a0002c0005t0041g0319	PJL	SAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG03654	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0150	PJL	SAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG03654	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0138	PJL	SAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG03654	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0326	PJL	SAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG03654	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0029	PJL	SAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG03654	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0166	PJL	SAS	ABCA12	chr2	214926542	215143626