Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02976	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0016	ESN	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02976	hp2	a0002	a0002c0002	a0002c0002t0008	a0002c0002t0008g0027	ESN	AFR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG02976	hp1	a0001	a0001c0001	a0001c0001t0039	a0001c0001t0039g0038	ESN	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02976	hp2	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0093	ESN	AFR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02976	hp1	a0006	a0006c0011	a0006c0011t0002	a0006c0011t0002g0032	ESN	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02976	hp2	a0020	a0020c0028	a0020c0028t0001	a0020c0028t0001g0092	ESN	AFR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG02976	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0016	ESN	AFR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02976	hp2	a0005	a0005c0007	a0005c0007t0001	a0005c0007t0001g0246	ESN	AFR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02976	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0100	ESN	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02976	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0088	ESN	AFR	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	HG02976	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0025	ESN	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02976	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0152	ESN	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02976	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0172	ESN	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02976	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0014	ESN	AFR	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	HG02976	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	ESN	AFR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02976	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0002	ESN	AFR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02976	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0059	ESN	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02976	hp2	a0002	a0002c0003	a0002c0003t0005	a0002c0003t0005g0035	ESN	AFR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02976	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0189	ESN	AFR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02976	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0057	ESN	AFR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG02976	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	ESN	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02976	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0011	ESN	AFR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02976	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0078	ESN	AFR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02976	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0061	ESN	AFR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02976	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	ESN	AFR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02976	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0264	ESN	AFR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG02976	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0160	ESN	AFR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02976	hp2	a0001	a0001c0007	a0001c0007t0148	a0001c0007t0148g0277	ESN	AFR	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	HG02976	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	ESN	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02976	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0014	ESN	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02976	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	ESN	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02976	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	ESN	AFR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02976	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0130	ESN	AFR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02976	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0183	ESN	AFR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02976	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0011	ESN	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02976	hp2	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0003	ESN	AFR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02976	hp1	a0011	a0011c0008	a0011c0008t0001	a0011c0008t0001g0159	ESN	AFR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02976	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0175	ESN	AFR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG02976	hp1	a0002	a0002c0003	a0002c0003t0013	a0002c0003t0013g0042	ESN	AFR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02976	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0009	ESN	AFR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG02976	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	ESN	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02976	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0040	ESN	AFR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG02976	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	ESN	AFR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02976	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0059	ESN	AFR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG02976	hp1	a0001	a0001c0010	a0001c0010t0001	a0001c0010t0001g0280	ESN	AFR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02976	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	ESN	AFR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG02976	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0133	ESN	AFR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02976	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	ESN	AFR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG02976	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	ESN	AFR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG02976	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0108	ESN	AFR	AATF	chr17	36943954	37061871