Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02622	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GWD	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02622	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	GWD	AFR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG02622	hp1	a0002	a0002c0004	a0002c0004t0006	a0002c0004t0006g0226	GWD	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02622	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0267	GWD	AFR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02622	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0125	GWD	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02622	hp2	a0026	a0026c0056	a0026c0056t0003	a0026c0056t0003g0133	GWD	AFR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG02622	hp1	a0001	a0001c0005	a0001c0005t0002	a0001c0005t0002g0134	GWD	AFR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02622	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0143	GWD	AFR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02622	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0036	GWD	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02622	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0012	GWD	AFR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02622	hp1	a0005	a0005c0006	a0005c0006t0001	a0005c0006t0001g0262	GWD	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02622	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0231	GWD	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02622	hp1	a0003	a0003c0006	a0003c0006t0001	a0003c0006t0001g0027	GWD	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02622	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0148	GWD	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02622	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0131	GWD	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02622	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0042	GWD	AFR	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	HG02622	hp1	a0001	a0001c0001	a0001c0001t0063	a0001c0001t0063g0058	GWD	AFR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02622	hp2	a0005	a0005c0006	a0005c0006t0022	a0005c0006t0022g0120	GWD	AFR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02622	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0096	GWD	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02622	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0026	GWD	AFR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG02622	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0030	GWD	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02622	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0064	GWD	AFR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02622	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0189	GWD	AFR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02622	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0085	GWD	AFR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02622	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0256	GWD	AFR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02622	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0268	GWD	AFR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG02622	hp1	a0002	a0002c0005	a0002c0005t0018	a0002c0005t0018g0104	GWD	AFR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02622	hp2	a0001	a0001c0003	a0001c0003t0026	a0001c0003t0026g0014	GWD	AFR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG02622	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0226	GWD	AFR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02622	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0223	GWD	AFR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02622	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	GWD	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02622	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	GWD	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02622	hp1	a0002	a0002c0005	a0002c0005t0001	a0002c0005t0001g0009	GWD	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02622	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GWD	AFR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02622	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0006	GWD	AFR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02622	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0031	GWD	AFR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02622	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0007	GWD	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02622	hp2	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0005	GWD	AFR	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	HG02622	hp1	a0002	a0002c0003	a0002c0003t0004	a0002c0003t0004g0007	GWD	AFR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02622	hp2	a0002	a0002c0003	a0002c0003t0004	a0002c0003t0004g0010	GWD	AFR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG02622	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0155	GWD	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02622	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0008	GWD	AFR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG02622	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0097	GWD	AFR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02622	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0036	GWD	AFR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG02622	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0289	GWD	AFR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02622	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0291	GWD	AFR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG02622	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	GWD	AFR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02622	hp2	a0001	a0001c0003	a0001c0003t0010	a0001c0003t0010g0063	GWD	AFR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG02622	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0082	GWD	AFR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG02622	hp2	a0004	a0004c0010	a0004c0010t0001	a0004c0010t0001g0018	GWD	AFR	AATF	chr17	36943954	37061871