Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA21309	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0048	LWK	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA21309	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0008	LWK	AFR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA21309	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0005	LWK	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA21309	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0101	LWK	AFR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA21309	hp1	a0016	a0016c0043	a0016c0043t0002	a0016c0043t0002g0126	LWK	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA21309	hp2	a0001	a0001c0060	a0001c0060t0002	a0001c0060t0002g0070	LWK	AFR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA21309	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0141	LWK	AFR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA21309	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0015	LWK	AFR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA21309	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0107	LWK	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA21309	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0061	LWK	AFR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA21309	hp1	a0002	a0002c0008	a0002c0008t0001	a0002c0008t0001g0346	LWK	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA21309	hp2	a0002	a0002c0003	a0002c0003t0017	a0002c0003t0017g0267	LWK	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA21309	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0151	LWK	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA21309	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0131	LWK	AFR	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA21309	hp1	a0001	a0001c0001	a0001c0001t0015	a0001c0001t0015g0116	LWK	AFR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA21309	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0021	LWK	AFR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA21309	hp1	a0004	a0004c0007	a0004c0007t0019	a0004c0007t0019g0043	LWK	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA21309	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0099	LWK	AFR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA21309	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0129	LWK	AFR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA21309	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0067	LWK	AFR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA21309	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	LWK	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA21309	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0026	LWK	AFR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA21309	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0120	LWK	AFR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA21309	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	LWK	AFR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA21309	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0359	LWK	AFR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA21309	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0154	LWK	AFR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA21309	hp1	a0001	a0001c0001	a0001c0001t0083	a0001c0001t0083g0016	LWK	AFR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA21309	hp2	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0066	LWK	AFR	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	NA21309	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0007	LWK	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA21309	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	LWK	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA21309	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	LWK	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA21309	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	LWK	AFR	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA21309	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0003	LWK	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA21309	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	LWK	AFR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA21309	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0178	LWK	AFR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA21309	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0130	LWK	AFR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA21309	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	LWK	AFR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA21309	hp2	a0002	a0002c0003	a0002c0003t0008	a0002c0003t0008g0017	LWK	AFR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA21309	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	LWK	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA21309	hp2	a0007	a0007c0011	a0007c0011t0001	a0007c0011t0001g0097	LWK	AFR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA21309	hp1	a0001	a0001c0001	a0001c0001t0026	a0001c0001t0026g0018	LWK	AFR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA21309	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0050	LWK	AFR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA21309	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0235	LWK	AFR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA21309	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0315	LWK	AFR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA21309	hp1	a0011	a0011c0013	a0011c0013t0001	a0011c0013t0001g0058	LWK	AFR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA21309	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0091	LWK	AFR	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA21309	hp1	a0003	a0003c0007	a0003c0007t0001	a0003c0007t0001g0280	LWK	AFR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA21309	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0305	LWK	AFR	AATK	chr17	81112295	81171221
ABCA10_chr17_69143007_69233824	NA21309	hp1	a0021	a0021c0023	a0021c0023t0001	a0021c0023t0001g0211	LWK	AFR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA21309	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0327	LWK	AFR	ABCA10	chr17	69143007	69233824