Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG03098	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	MSL	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG03098	hp2	a0002	a0002c0002	a0002c0002t0006	a0002c0002t0006g0017	MSL	AFR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG03098	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0005	MSL	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG03098	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0247	MSL	AFR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG03098	hp1	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0124	MSL	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG03098	hp2	a0019	a0019c0027	a0019c0027t0002	a0019c0027t0002g0030	MSL	AFR	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	HG03098	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0058	MSL	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG03098	hp2	a0004	a0004c0007	a0004c0007t0000	a0004c0007t0000g0093	MSL	AFR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG03098	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0288	MSL	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG03098	hp2	a0001	a0001c0002	a0001c0002t0023	a0001c0002t0023g0278	MSL	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG03098	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0190	MSL	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG03098	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	MSL	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG03098	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	MSL	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG03098	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	MSL	AFR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG03098	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0269	MSL	AFR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG03098	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0009	MSL	AFR	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	HG03098	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0082	MSL	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG03098	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0076	MSL	AFR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG03098	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0045	MSL	AFR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG03098	hp2	a0001	a0001c0006	a0001c0006t0004	a0001c0006t0004g0049	MSL	AFR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG03098	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0057	MSL	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG03098	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0078	MSL	AFR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG03098	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0066	MSL	AFR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG03098	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0125	MSL	AFR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG03098	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0270	MSL	AFR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG03098	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0262	MSL	AFR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG03098	hp1	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0084	MSL	AFR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG03098	hp2	a0002	a0002c0005	a0002c0005t0150	a0002c0005t0150g0281	MSL	AFR	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	HG03098	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	MSL	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG03098	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0044	MSL	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG03098	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	MSL	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG03098	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	MSL	AFR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG03098	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0149	MSL	AFR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG03098	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0179	MSL	AFR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG03098	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0003	MSL	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG03098	hp2	a0001	a0001c0001	a0001c0001t0015	a0001c0001t0015g0027	MSL	AFR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG03098	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0296	MSL	AFR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG03098	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0344	MSL	AFR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG03098	hp1	a0002	a0002c0003	a0002c0003t0004	a0002c0003t0004g0007	MSL	AFR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG03098	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	MSL	AFR	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	HG03098	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0064	MSL	AFR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG03098	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0029	MSL	AFR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG03098	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0095	MSL	AFR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG03098	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0117	MSL	AFR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG03098	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0048	MSL	AFR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG03098	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0117	MSL	AFR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG03098	hp1	a0001	a0001c0003	a0001c0003t0004	a0001c0003t0004g0045	MSL	AFR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG03098	hp2	a0003	a0003c0005	a0003c0005t0001	a0003c0005t0001g0095	MSL	AFR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG03098	hp1	a0005	a0005c0006	a0005c0006t0003	a0005c0006t0003g0328	MSL	AFR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG03098	hp2	a0038	a0038c0034	a0038c0034t0002	a0038c0034t0002g0309	MSL	AFR	AATK	chr17	81112295	81171221