Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01257	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01257	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG01257	hp1	a0001	a0001c0001	a0001c0001t0021	a0001c0001t0021g0110	CLM	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG01257	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0016	CLM	AMR	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	HG01257	hp1	a0003	a0003c0004	a0003c0004t0001	a0003c0004t0001g0001	CLM	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01257	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0036	CLM	AMR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG01257	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0005	CLM	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01257	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0215	CLM	AMR	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	HG01257	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	CLM	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01257	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0104	CLM	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01257	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	CLM	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01257	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	CLM	AMR	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	HG01257	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0007	CLM	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01257	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01257	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01257	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG01257	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	CLM	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01257	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0023	CLM	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01257	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0041	CLM	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01257	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	CLM	AMR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG01257	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0164	CLM	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01257	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0294	CLM	AMR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG01257	hp1	a0001	a0001c0001	a0001c0001t0147	a0001c0001t0147g0274	CLM	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01257	hp2	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0147	CLM	AMR	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	HG01257	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CLM	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01257	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01257	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01257	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01257	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0026	CLM	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01257	hp2	a0001	a0001c0001	a0001c0001t0012	a0001c0001t0012g0069	CLM	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG01257	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01257	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01257	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0164	CLM	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01257	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0002	CLM	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01257	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0006	CLM	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01257	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0004	CLM	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG01257	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	CLM	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01257	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG01257	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0004	CLM	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01257	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG01257	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	CLM	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01257	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0209	CLM	AMR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG01257	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0131	CLM	AMR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG01257	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0178	CLM	AMR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG01257	hp1	a0004	a0004c0005	a0004c0005t0001	a0004c0005t0001g0077	CLM	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01257	hp2	a0016	a0016c0026	a0016c0026t0001	a0016c0026t0001g0011	CLM	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01257	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0034	CLM	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01257	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0255	CLM	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG01257	hp1	a0002	a0002c0015	a0002c0015t0001	a0002c0015t0001g0003	CLM	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01257	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0113	CLM	AMR	ABCA10	chr17	69143007	69233824