Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01928	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	PEL	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01928	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG01928	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0153	PEL	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01928	hp2	a0041	a0041c0059	a0041c0059t0002	a0041c0059t0002g0335	PEL	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG01928	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0006	PEL	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01928	hp2	a0003	a0003c0004	a0003c0004t0001	a0003c0004t0001g0163	PEL	AMR	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	HG01928	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0198	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01928	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0045	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01928	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PEL	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01928	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0166	PEL	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01928	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	PEL	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01928	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01928	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0324	PEL	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01928	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0105	PEL	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01928	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0132	PEL	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01928	hp2	a0002	a0002c0002	a0002c0002t0010	a0002c0002t0010g0007	PEL	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01928	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0139	PEL	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01928	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	PEL	AMR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG01928	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PEL	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01928	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0023	PEL	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01928	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0165	PEL	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01928	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0175	PEL	AMR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG01928	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0230	PEL	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01928	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	PEL	AMR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG01928	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0222	PEL	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01928	hp2	a0003	a0003c0021	a0003c0021t0151	a0003c0021t0151g0282	PEL	AMR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG01928	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0245	PEL	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01928	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0307	PEL	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01928	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01928	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01928	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01928	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG01928	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PEL	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01928	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0001	PEL	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01928	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0193	PEL	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01928	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0186	PEL	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01928	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	PEL	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01928	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	HG01928	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	PEL	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01928	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PEL	AMR	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG01928	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0031	PEL	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01928	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0026	PEL	AMR	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG01928	hp1	a0028	a0028c0051	a0028c0051t0001	a0028c0051t0001g0029	PEL	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01928	hp2	a0003	a0003c0003	a0003c0003t0006	a0003c0003t0006g0060	PEL	AMR	AATK	chr17	81112295	81171221
ABCA10_chr17_69143007_69233824	HG01928	hp1	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0232	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01928	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0275	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG01928	hp1	a0001	a0001c0011	a0001c0011t0001	a0001c0011t0001g0126	PEL	AMR	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG01928	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0172	PEL	AMR	ABCA12	chr2	214926542	215143626
ABCA2_chr9_137002234_137033237	HG01928	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0010	PEL	AMR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG01928	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0031	PEL	AMR	ABCA2	chr9	137002234	137033237