Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02293	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02293	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	PEL	AMR	A1BG	chr19	58340183	58358492
A2M_chr12_9062708_9120919	HG02293	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0109	PEL	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02293	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0130	PEL	AMR	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	HG02293	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0036	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02293	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0363	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02293	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0146	PEL	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02293	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PEL	AMR	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	HG02293	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0033	PEL	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02293	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0310	PEL	AMR	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	HG02293	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0095	PEL	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02293	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG02293	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0009	PEL	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02293	hp2	a0004	a0004c0006	a0004c0006t0001	a0004c0006t0001g0005	PEL	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02293	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0127	PEL	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02293	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0067	PEL	AMR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02293	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0300	PEL	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02293	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0214	PEL	AMR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG02293	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0245	PEL	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02293	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0205	PEL	AMR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG02293	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0257	PEL	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02293	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0299	PEL	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02293	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02293	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02293	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02293	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02293	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PEL	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02293	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0001	PEL	AMR	AAR2	chr20	36231478	36261933
AARS2_chr6_44293731_44318347	HG02293	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02293	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0004	PEL	AMR	AARS2	chr6	44293731	44318347
AASDH_chr4_56333290_56392491	HG02293	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0195	PEL	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02293	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0298	PEL	AMR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG02293	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0271	PEL	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02293	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0100	PEL	AMR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG02293	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0201	PEL	AMR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG02293	hp2	a0005	a0005c0008	a0005c0008t0001	a0005c0008t0001g0101	PEL	AMR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG02293	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0003	PEL	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02293	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0159	PEL	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG02293	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0051	PEL	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02293	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0258	PEL	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG02293	hp1	a0003	a0003c0003	a0003c0003t0005	a0003c0003t0005g0323	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG02293	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0143	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG02293	hp1	a0001	a0001c0011	a0001c0011t0001	a0001c0011t0001g0085	PEL	AMR	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG02293	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0042	PEL	AMR	ABCA12	chr2	214926542	215143626
ABCA1_chr9_104776006_104933155	HG02293	hp1	a0004	a0004c0008	a0004c0008t0003	a0004c0008t0003g0197	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG02293	hp2	a0001	a0001c0005	a0001c0005t0002	a0001c0005t0002g0017	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA4_chr1_93987834_94126148	HG02293	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0082	PEL	AMR	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	HG02293	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0094	PEL	AMR	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	HG02293	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0310	PEL	AMR	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	HG02293	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0229	PEL	AMR	ABCA5	chr17	69239311	69332133