Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG00639	hp1	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0015	PUR	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG00639	hp1	a0002	a0002c0004	a0002c0004t0006	a0002c0004t0006g0269	PUR	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0197	PUR	AMR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG00639	hp1	a0011	a0011c0016	a0011c0016t0006	a0011c0016t0006g0343	PUR	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG00639	hp2	a0003	a0003c0010	a0003c0010t0003	a0003c0010t0003g0090	PUR	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG00639	hp1	a0001	a0001c0021	a0001c0021t0002	a0001c0021t0002g0076	PUR	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	PUR	AMR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG00639	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0071	PUR	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG00639	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0062	PUR	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG00639	hp1	a0005	a0005c0006	a0005c0006t0001	a0005c0006t0001g0261	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG00639	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0010	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PUR	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG00639	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	PUR	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG00639	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0020	PUR	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0077	PUR	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG00639	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0224	PUR	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0093	PUR	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG00639	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0008	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG00639	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0004	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG00639	hp1	a0003	a0003c0005	a0003c0005t0007	a0003c0005t0007g0003	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG00639	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	PUR	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG00639	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0009	PUR	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0184	PUR	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG00639	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0047	PUR	AMR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0279	PUR	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG00639	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0039	PUR	AMR	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG00639	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0250	PUR	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG00639	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0240	PUR	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0142	PUR	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0189	PUR	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG00639	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PUR	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0026	PUR	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG00639	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0305	PUR	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG00639	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0291	PUR	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG00639	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	PUR	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG00639	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0004	PUR	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0033	PUR	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0062	PUR	AMR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG00639	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0002	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG00639	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0271	PUR	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0062	PUR	AMR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG00639	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0035	PUR	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG00639	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PUR	AMR	AASS	chr7	122068549	122149249