Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG00642	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG00642	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG00642	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0050	PUR	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG00642	hp2	a0005	a0005c0009	a0005c0009t0001	a0005c0009t0001g0001	PUR	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG00642	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0021	PUR	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG00642	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0004	PUR	AMR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG00642	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0003	PUR	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG00642	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0114	PUR	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG00642	hp1	a0001	a0001c0002	a0001c0002t0027	a0001c0002t0027g0396	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG00642	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0095	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG00642	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	PUR	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG00642	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PUR	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG00642	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG00642	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0045	PUR	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG00642	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0258	PUR	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG00642	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0133	PUR	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG00642	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0008	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG00642	hp2	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0006	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG00642	hp1	a0005	a0005c0006	a0005c0006t0035	a0005c0006t0035g0079	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG00642	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG00642	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0191	PUR	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG00642	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0224	PUR	AMR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG00642	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0035	PUR	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG00642	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	PUR	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG00642	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0145	PUR	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG00642	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	AADAT	chr4	170055222	170094956
AAMP_chr2_218259129_218275137	HG00642	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG00642	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG00642	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG00642	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PUR	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG00642	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	PUR	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG00642	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	PUR	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG00642	hp1	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0002	PUR	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG00642	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG00642	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0157	PUR	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG00642	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0246	PUR	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG00642	hp1	a0001	a0001c0001	a0001c0001t0023	a0001c0001t0023g0083	PUR	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG00642	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0004	PUR	AMR	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	HG00642	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0066	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG00642	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0087	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG00642	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0279	PUR	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG00642	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	PUR	AMR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG00642	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0185	PUR	AMR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG00642	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0146	PUR	AMR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG00642	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PUR	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG00642	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0302	PUR	AMR	AATK	chr17	81112295	81171221
ABCA10_chr17_69143007_69233824	HG00642	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0155	PUR	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG00642	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0206	PUR	AMR	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	HG00642	hp1	a0005	a0005c0016	a0005c0016t0001	a0005c0016t0001g0009	PUR	AMR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG00642	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0203	PUR	AMR	ABCA1	chr9	104776006	104933155