Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01192	hp1	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0098	PUR	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01192	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG01192	hp1	a0001	a0001c0001	a0001c0001t0010	a0001c0001t0010g0097	PUR	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG01192	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0086	PUR	AMR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG01192	hp1	a0004	a0004c0053	a0004c0053t0004	a0004c0053t0004g0344	PUR	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01192	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0072	PUR	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG01192	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0152	PUR	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01192	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0150	PUR	AMR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG01192	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	PUR	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01192	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0096	PUR	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01192	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0078	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01192	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0119	PUR	AMR	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	HG01192	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0078	PUR	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01192	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0100	PUR	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01192	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0229	PUR	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01192	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0299	PUR	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01192	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0008	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01192	hp2	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0014	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01192	hp1	a0005	a0005c0014	a0005c0014t0006	a0005c0014t0006g0097	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01192	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0002	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG01192	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0180	PUR	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG01192	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0073	PUR	AMR	AADACL4	chr1	12639085	12672076
AAK1_chr2_69452997_69648739	HG01192	hp1	a0001	a0001c0001	a0001c0001t0095	a0001c0001t0095g0136	PUR	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01192	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0057	PUR	AMR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG01192	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0042	PUR	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01192	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0335	PUR	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01192	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01192	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	PUR	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01192	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PUR	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01192	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01192	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0152	PUR	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01192	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AAR2	chr20	36231478	36261933
AARS1_chr16_70247298_70294506	HG01192	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0189	PUR	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01192	hp2	a0004	a0004c0006	a0004c0006t0001	a0004c0006t0001g0318	PUR	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01192	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0043	PUR	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01192	hp2	a0001	a0001c0002	a0001c0002t0010	a0001c0002t0010g0038	PUR	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG01192	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PUR	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01192	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	HG01192	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0204	PUR	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG01192	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	PUR	AMR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG01192	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0010	PUR	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01192	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0310	PUR	AMR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG01192	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0230	PUR	AMR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG01192	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	PUR	AMR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG01192	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PUR	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01192	hp2	a0002	a0002c0073	a0002c0073t0007	a0002c0073t0007g0196	PUR	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01192	hp1	a0002	a0002c0006	a0002c0006t0003	a0002c0006t0003g0023	PUR	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01192	hp2	a0002	a0002c0002	a0002c0002t0006	a0002c0002t0006g0043	PUR	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG01192	hp1	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0234	PUR	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01192	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0250	PUR	AMR	ABCA10	chr17	69143007	69233824