Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01243	hp1	a0002	a0002c0002	a0002c0002t0006	a0002c0002t0006g0017	PUR	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01243	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0009	PUR	AMR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG01243	hp1	a0001	a0001c0001	a0001c0001t0019	a0001c0001t0019g0241	PUR	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG01243	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0268	PUR	AMR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG01243	hp1	a0011	a0011c0016	a0011c0016t0006	a0011c0016t0006g0341	PUR	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01243	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0073	PUR	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG01243	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0151	PUR	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01243	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0077	PUR	AMR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG01243	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0012	PUR	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01243	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0063	PUR	AMR	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	HG01243	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0068	PUR	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01243	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PUR	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01243	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0121	PUR	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01243	hp2	a0001	a0001c0010	a0001c0010t0001	a0001c0010t0001g0080	PUR	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01243	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0036	PUR	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01243	hp2	a0005	a0005c0014	a0005c0014t0001	a0005c0014t0001g0339	PUR	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01243	hp1	a0001	a0001c0001	a0001c0001t0027	a0001c0001t0027g0142	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01243	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0119	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01243	hp1	a0005	a0005c0006	a0005c0006t0006	a0005c0006t0006g0007	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01243	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG01243	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0010	PUR	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01243	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0030	PUR	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01243	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0082	PUR	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01243	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	HG01243	hp1	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0060	PUR	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01243	hp2	a0001	a0001c0001	a0001c0001t0140	a0001c0001t0140g0269	PUR	AMR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG01243	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0346	PUR	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01243	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0091	PUR	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01243	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01243	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01243	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01243	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01243	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0140	PUR	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01243	hp2	a0001	a0001c0002	a0001c0002t0011	a0001c0002t0011g0166	PUR	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG01243	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	PUR	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01243	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0003	PUR	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01243	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0051	PUR	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01243	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0209	PUR	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01243	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0012	PUR	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01243	hp2	a0006	a0006c0008	a0006c0008t0001	a0006c0008t0001g0019	PUR	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG01243	hp1	a0004	a0004c0005	a0004c0005t0001	a0004c0005t0001g0150	PUR	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01243	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	PUR	AMR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG01243	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01243	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0031	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG01243	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0251	PUR	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG01243	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0009	PUR	AMR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG01243	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0122	PUR	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01243	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0093	PUR	AMR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG01243	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0196	PUR	AMR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG01243	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0070	PUR	AMR	AATF	chr17	36943954	37061871