Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18612	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	CHB	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18612	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHB	EAS	A1BG	chr19	58340183	58358492
A3GALT2_chr1_33301766_33326098	NA18612	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	CHB	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18612	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0003	CHB	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18612	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0128	CHB	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18612	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0132	CHB	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18612	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0004	CHB	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18612	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0015	CHB	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA18612	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHB	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18612	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0037	CHB	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA18612	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0218	CHB	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18612	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0044	CHB	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18612	hp1	a0002	a0002c0002	a0002c0002t0041	a0002c0002t0041g0005	CHB	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18612	hp2	a0002	a0002c0002	a0002c0002t0010	a0002c0002t0010g0013	CHB	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18612	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0118	CHB	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18612	hp2	a0005	a0005c0014	a0005c0014t0006	a0005c0014t0006g0014	CHB	EAS	AADACL3	chr1	12711110	12733760
AADAT_chr4_170055222_170094956	NA18612	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0070	CHB	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18612	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	CHB	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18612	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0165	CHB	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18612	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHB	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18612	hp1	a0001	a0001c0003	a0001c0003t0108	a0001c0003t0108g0138	CHB	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18612	hp2	a0002	a0002c0002	a0002c0002t0055	a0002c0002t0055g0021	CHB	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA18612	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0320	CHB	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18612	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0049	CHB	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18612	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	CHB	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18612	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0036	CHB	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18612	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	CHB	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18612	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHB	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA18612	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	CHB	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18612	hp2	a0001	a0001c0001	a0001c0001t0017	a0001c0001t0017g0001	CHB	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18612	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0199	CHB	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18612	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	CHB	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18612	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	CHB	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18612	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	CHB	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18612	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CHB	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18612	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0032	CHB	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18612	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0074	CHB	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18612	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0136	CHB	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18612	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0025	CHB	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18612	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	CHB	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA18612	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0048	CHB	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA18612	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0221	CHB	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	NA18612	hp1	a0003	a0003c0009	a0003c0009t0001	a0003c0009t0001g0326	CHB	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18612	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0087	CHB	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18612	hp1	a0002	a0002c0005	a0002c0005t0001	a0002c0005t0001g0215	CHB	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18612	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0131	CHB	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA18612	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0284	CHB	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18612	hp2	a0004	a0004c0006	a0004c0006t0003	a0004c0006t0003g0152	CHB	EAS	ABCA10	chr17	69143007	69233824
ABCA3_chr16_2270881_2345728	NA18612	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0127	CHB	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA18612	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0228	CHB	EAS	ABCA3	chr16	2270881	2345728