Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG00609	hp1	a0001	a0001c0001	a0001c0001t0016	a0001c0001t0016g0076	CHS	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG00609	hp1	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0009	CHS	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG00609	hp2	a0002	a0002c0007	a0002c0007t0003	a0002c0007t0003g0230	CHS	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	CHS	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG00609	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0125	CHS	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG00609	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0002	CHS	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG00609	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0228	CHS	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0194	CHS	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0144	CHS	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0047	CHS	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	CHS	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	HG00609	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0056	CHS	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG00609	hp2	a0002	a0002c0002	a0002c0002t0012	a0002c0002t0012g0115	CHS	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CHS	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG00609	hp2	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0005	CHS	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG00609	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	CHS	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG00609	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0095	CHS	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG00609	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0012	CHS	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	CHS	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0299	CHS	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG00609	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0221	CHS	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0339	CHS	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0167	CHS	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CHS	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CHS	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG00609	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0002	CHS	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	CHS	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	CHS	EAS	AAR2	chr20	36231478	36261933
AARS1_chr16_70247298_70294506	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0084	CHS	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0085	CHS	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG00609	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	CHS	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	CHS	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG00609	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0243	CHS	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG00609	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	CHS	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG00609	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0032	CHS	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG00609	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0134	CHS	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG00609	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0109	CHS	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG00609	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0089	CHS	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG00609	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0209	CHS	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG00609	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0024	CHS	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG00609	hp2	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0239	CHS	EAS	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	HG00609	hp1	a0012	a0012c0040	a0012c0040t0040	a0012c0040t0040g0055	CHS	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG00609	hp2	a0006	a0006c0004	a0006c0004t0004	a0006c0004t0004g0227	CHS	EAS	ABCA1	chr9	104776006	104933155