Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA18980	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0179	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18980	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0118	JPT	EAS	A1CF	chr10	50794409	50890627
A3GALT2_chr1_33301766_33326098	NA18980	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0004	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18980	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0002	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18980	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0120	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18980	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0059	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18980	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0147	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18980	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0096	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA18980	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0102	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18980	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0172	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18980	hp1	a0001	a0001c0001	a0001c0001t0018	a0001c0001t0018g0006	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18980	hp2	a0002	a0002c0002	a0002c0002t0010	a0002c0002t0010g0013	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18980	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0069	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18980	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18980	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0239	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18980	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0261	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18980	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18980	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA18980	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0173	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18980	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0244	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18980	hp1	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0195	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18980	hp2	a0001	a0001c0003	a0001c0003t0012	a0001c0003t0012g0097	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA18980	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0058	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18980	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0365	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18980	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18980	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18980	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18980	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARS1_chr16_70247298_70294506	NA18980	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0137	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18980	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0304	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18980	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18980	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18980	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18980	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0051	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	NA18980	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0179	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18980	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0166	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA18980	hp1	a0001	a0001c0004	a0001c0004t0006	a0001c0004t0006g0104	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18980	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0284	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18980	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0146	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18980	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0288	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA2_chr9_137002234_137033237	NA18980	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0066	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18980	hp2	a0001	a0001c0046	a0001c0046t0001	a0001c0046t0001g0071	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA5_chr17_69239311_69332133	NA18980	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0276	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18980	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0134	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA8_chr17_68862289_68960392	NA18980	hp1	a0026	a0026c0043	a0026c0043t0001	a0026c0043t0001g0261	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18980	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0250	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA9_chr17_68969488_69065927	NA18980	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0153	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18980	hp2	a0005	a0005c0006	a0005c0006t0001	a0005c0006t0001g0280	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB10_chr1_229511582_229563707	NA18980	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0165	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA18980	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0064	JPT	EAS	ABCB10	chr1	229511582	229563707