Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19090	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19090	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA19090	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19090	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0183	JPT	EAS	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	NA19090	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0111	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19090	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0198	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA19090	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0142	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19090	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0182	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA19090	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0008	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19090	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0036	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA19090	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0041	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19090	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0118	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA19090	hp1	a0002	a0002c0002	a0002c0002t0026	a0002c0002t0026g0048	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19090	hp2	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0047	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19090	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0146	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19090	hp2	a0001	a0001c0001	a0001c0001t0032	a0001c0001t0032g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA19090	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19090	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA19090	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0181	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19090	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0328	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA19090	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0044	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19090	hp2	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0194	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA19090	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0304	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19090	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0118	JPT	EAS	AAMDC	chr11	77816144	77877352
AAR2_chr20_36231478_36261933	NA19090	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0124	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA19090	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA19090	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19090	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA19090	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0113	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19090	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0302	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA19090	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19090	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA19090	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0136	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA19090	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0110	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA19090	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19090	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19090	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0075	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19090	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0185	JPT	EAS	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	NA19090	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0234	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19090	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0260	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA19090	hp1	a0002	a0002c0002	a0002c0002t0038	a0002c0002t0038g0166	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19090	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0053	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA19090	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0278	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19090	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0144	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	NA19090	hp1	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0171	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	NA19090	hp2	a0001	a0001c0004	a0001c0004t0010	a0001c0004t0010g0198	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA1_chr9_104776006_104933155	NA19090	hp1	a0001	a0001c0005	a0001c0005t0002	a0001c0005t0002g0064	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA19090	hp2	a0005	a0005c0014	a0005c0014t0011	a0005c0014t0011g0222	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	NA19090	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0091	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA19090	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0194	JPT	EAS	ABCA2	chr9	137002234	137033237