Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG04184	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG04184	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG04184	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0090	BEB	SAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG04184	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0281	BEB	SAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG04184	hp1	a0005	a0005c0009	a0005c0009t0001	a0005c0009t0001g0111	BEB	SAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG04184	hp2	a0002	a0002c0007	a0002c0007t0003	a0002c0007t0003g0326	BEB	SAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG04184	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0078	BEB	SAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG04184	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0115	BEB	SAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG04184	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0156	BEB	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG04184	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0229	BEB	SAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG04184	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0069	BEB	SAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG04184	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0104	BEB	SAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG04184	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0138	BEB	SAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG04184	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0139	BEB	SAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG04184	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0095	BEB	SAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG04184	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0168	BEB	SAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG04184	hp1	a0001	a0001c0003	a0001c0003t0004	a0001c0003t0004g0083	BEB	SAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG04184	hp2	a0002	a0002c0002	a0002c0002t0007	a0002c0002t0007g0279	BEB	SAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG04184	hp1	a0001	a0001c0001	a0001c0001t0016	a0001c0001t0016g0011	BEB	SAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG04184	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	BEB	SAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG04184	hp1	a0001	a0001c0002	a0001c0002t0009	a0001c0002t0009g0033	BEB	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG04184	hp2	a0003	a0003c0009	a0003c0009t0003	a0003c0009t0003g0031	BEB	SAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG04184	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	BEB	SAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG04184	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0166	BEB	SAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG04184	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0021	BEB	SAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG04184	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0056	BEB	SAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG04184	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0166	BEB	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG04184	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0194	BEB	SAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG04184	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0195	BEB	SAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG04184	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0049	BEB	SAS	AAGAB	chr15	67195667	67259661
AANAT_chr17_76462603_76475117	HG04184	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG04184	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG04184	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG04184	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	BEB	SAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG04184	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0262	BEB	SAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG04184	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0259	BEB	SAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG04184	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG04184	hp2	a0001	a0001c0002	a0001c0002t0018	a0001c0002t0018g0088	BEB	SAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG04184	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	BEB	SAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG04184	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0073	BEB	SAS	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	HG04184	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0178	BEB	SAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG04184	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0296	BEB	SAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG04184	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0300	BEB	SAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG04184	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	BEB	SAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG04184	hp1	a0004	a0004c0005	a0004c0005t0001	a0004c0005t0001g0113	BEB	SAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG04184	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0147	BEB	SAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG04184	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0036	BEB	SAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG04184	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0140	BEB	SAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG04184	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0095	BEB	SAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG04184	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0202	BEB	SAS	ABCA10	chr17	69143007	69233824