Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18966	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18966	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA18966	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0142	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18966	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0177	JPT	EAS	A1CF	chr10	50794409	50890627
A3GALT2_chr1_33301766_33326098	NA18966	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0004	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18966	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0244	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18966	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0318	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18966	hp2	a0003	a0003c0004	a0003c0004t0006	a0003c0004t0006g0228	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18966	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18966	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0183	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA18966	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0153	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18966	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0101	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA18966	hp1	a0001	a0001c0004	a0001c0004t0004	a0001c0004t0004g0209	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18966	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0296	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18966	hp1	a0001	a0001c0001	a0001c0001t0021	a0001c0001t0021g0002	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18966	hp2	a0002	a0002c0002	a0002c0002t0012	a0002c0002t0012g0005	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL4_chr1_12639085_12672076	NA18966	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0145	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18966	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18966	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18966	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0107	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA18966	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0226	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18966	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0080	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18966	hp1	a0002	a0002c0002	a0002c0002t0023	a0002c0002t0023g0036	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18966	hp2	a0001	a0001c0003	a0001c0003t0012	a0001c0003t0012g0096	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA18966	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0113	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18966	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0100	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18966	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18966	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18966	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18966	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18966	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0143	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18966	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAR2	chr20	36231478	36261933
AARS1_chr16_70247298_70294506	NA18966	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0224	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18966	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0079	JPT	EAS	AARS1	chr16	70247298	70294506
AASDHPPT_chr11_106072662_106103695	NA18966	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18966	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0009	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18966	hp1	a0017	a0017c0022	a0017c0022t0001	a0017c0022t0001g0109	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18966	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0246	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18966	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0153	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18966	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0010	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA18966	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0164	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18966	hp2	a0011	a0011c0018	a0011c0018t0001	a0011c0018t0001g0080	JPT	EAS	AATK	chr17	81112295	81171221
ABCA3_chr16_2270881_2345728	NA18966	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0114	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA18966	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0019	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCB4_chr7_87396696_87480680	NA18966	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0108	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA18966	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0005	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB6_chr2_219204772_219223958	NA18966	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA18966	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0076	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB7_chrX_75046048_75161283	NA18966	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0144	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCB9_chr12_122923992_122971463	NA18966	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0200	JPT	EAS	ABCB9	chr12	122923992	122971463