Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18983	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18983	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA18983	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18983	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0063	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18983	hp1	a0001	a0001c0008	a0001c0008t0001	a0001c0008t0001g0004	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18983	hp2	a0002	a0002c0007	a0002c0007t0003	a0002c0007t0003g0264	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18983	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0252	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18983	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18983	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0002	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18983	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0004	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18983	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0106	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18983	hp2	a0001	a0001c0002	a0001c0002t0006	a0001c0002t0006g0215	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18983	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18983	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0162	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA18983	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0040	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18983	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA18983	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0174	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18983	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0121	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18983	hp1	a0002	a0002c0002	a0002c0002t0012	a0002c0002t0012g0108	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18983	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0002	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18983	hp1	a0006	a0006c0015	a0006c0015t0011	a0006c0015t0011g0045	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18983	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA18983	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18983	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18983	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0056	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18983	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	NA18983	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0038	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18983	hp2	a0001	a0001c0001	a0001c0001t0086	a0001c0001t0086g0167	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA18983	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0295	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18983	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0196	JPT	EAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	NA18983	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18983	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18983	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0001	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18983	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18983	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18983	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18983	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0190	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18983	hp2	a0001	a0001c0010	a0001c0010t0001	a0001c0010t0001g0187	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18983	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18983	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18983	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18983	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARSD1	chr17	42945526	42969454
AASS_chr7_122068549_122149249	NA18983	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0009	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18983	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	JPT	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA18983	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0142	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA18983	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0162	JPT	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	NA18983	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0102	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18983	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0194	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18983	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0119	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18983	hp2	a0001	a0001c0003	a0001c0003t0004	a0001c0003t0004g0294	JPT	EAS	ABAT	chr16	8669617	8789570