Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2ML1_chr12_8817621_8881787	NA18992	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0162	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18992	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0310	JPT	EAS	A2ML1	chr12	8817621	8881787
AAAS_chr12_53302460_53326610	NA18992	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0126	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18992	hp2	a0003	a0003c0009	a0003c0009t0001	a0003c0009t0001g0188	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA18992	hp1	a0001	a0001c0004	a0001c0004t0004	a0001c0004t0004g0328	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18992	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0227	JPT	EAS	AACS	chr12	125060435	125148316
AADACL4_chr1_12639085_12672076	NA18992	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18992	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0247	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18992	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18992	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18992	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18992	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0173	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18992	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0342	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18992	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0123	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18992	hp1	a0001	a0001c0001	a0001c0001t0143	a0001c0001t0143g0198	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18992	hp2	a0002	a0002c0002	a0002c0002t0085	a0002c0002t0085g0109	JPT	EAS	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	NA18992	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18992	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18992	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18992	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0011	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA18992	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18992	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18992	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0105	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18992	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0279	JPT	EAS	AARS1	chr16	70247298	70294506
AASDHPPT_chr11_106072662_106103695	NA18992	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18992	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0062	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18992	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0011	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18992	hp2	a0010	a0010c0013	a0010c0013t0001	a0010c0013t0001g0067	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18992	hp1	a0003	a0003c0004	a0003c0004t0001	a0003c0004t0001g0129	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18992	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0231	JPT	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA18992	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0222	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA18992	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0067	JPT	EAS	AATF	chr17	36943954	37061871
ABCA13_chr7_48166458_48652497	NA18992	hp1	a0006	a0006c0007	a0006c0007t0002	a0006c0007t0002g0129	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA18992	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0064	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	NA18992	hp1	a0003	a0003c0009	a0003c0009t0003	a0003c0009t0003g0178	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18992	hp2	a0008	a0008c0006	a0008c0006t0022	a0008c0006t0022g0135	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA4_chr1_93987834_94126148	NA18992	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0227	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18992	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0028	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA9_chr17_68969488_69065927	NA18992	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0006	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18992	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0227	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB1_chr7_87498017_87605884	NA18992	hp1	a0003	a0003c0004	a0003c0004t0005	a0003c0004t0005g0014	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA18992	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0160	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB4_chr7_87396696_87480680	NA18992	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0016	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA18992	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0080	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCC2_chr10_99777640_99857594	NA18992	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0202	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC2_chr10_99777640_99857594	NA18992	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0066	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC3_chr17_50629881_50697253	NA18992	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0041	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC3_chr17_50629881_50697253	NA18992	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0251	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC5_chr3_183914934_184022884	NA18992	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0017	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC5_chr3_183914934_184022884	NA18992	hp2	a0001	a0001c0022	a0001c0022t0003	a0001c0022t0003g0024	JPT	EAS	ABCC5	chr3	183914934	184022884