Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19074	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0012	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA19074	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0199	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19074	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0070	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA19074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0352	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19074	hp2	a0007	a0007c0013	a0007c0013t0001	a0007c0013t0001g0158	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA19074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0173	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0254	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA19074	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0055	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19074	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0006	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA19074	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0103	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19074	hp2	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0146	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19074	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL3_chr1_12711110_12733760	NA19074	hp1	a0018	a0018c0032	a0018c0032t0001	a0018c0032t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19074	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0010	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAT_chr4_170055222_170094956	NA19074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0108	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0146	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA19074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0312	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19074	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0102	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA19074	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0158	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19074	hp2	a0002	a0002c0002	a0002c0002t0050	a0002c0002t0050g0035	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA19074	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0007	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0097	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA19074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19074	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0030	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19074	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA19074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0090	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19074	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0267	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA19074	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19074	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AASS_chr7_122068549_122149249	NA19074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0089	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19074	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0180	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA19074	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0055	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19074	hp2	a0002	a0002c0002	a0002c0002t0018	a0002c0002t0018g0151	JPT	EAS	AATK	chr17	81112295	81171221
ABCA10_chr17_69143007_69233824	NA19074	hp1	a0004	a0004c0006	a0004c0006t0003	a0004c0006t0003g0053	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19074	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0171	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA13_chr7_48166458_48652497	NA19074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0063	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA19074	hp2	a0005	a0005c0005	a0005c0005t0003	a0005c0005t0003g0102	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA5_chr17_69239311_69332133	NA19074	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0251	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19074	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0127	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA19074	hp1	a0004	a0004c0004	a0004c0004t0002	a0004c0004t0002g0138	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19074	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0213	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA9_chr17_68969488_69065927	NA19074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0185	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19074	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0150	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB1_chr7_87498017_87605884	NA19074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0194	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA19074	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0323	JPT	EAS	ABCB1	chr7	87498017	87605884