Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02135	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0032	KHV	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02135	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	KHV	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG02135	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0134	KHV	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02135	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0190	KHV	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02135	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0174	KHV	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02135	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0299	KHV	EAS	A2ML1	chr12	8817621	8881787
A4GALT_chr22_42687121_42725870	HG02135	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0182	KHV	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02135	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0188	KHV	EAS	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	HG02135	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0145	KHV	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02135	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	KHV	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG02135	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0347	KHV	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02135	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0337	KHV	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02135	hp1	a0001	a0001c0001	a0001c0001t0055	a0001c0001t0055g0006	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02135	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0003	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02135	hp1	a0002	a0002c0003	a0002c0003t0039	a0002c0003t0039g0005	KHV	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02135	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG02135	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	KHV	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02135	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	KHV	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02135	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0171	KHV	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02135	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	KHV	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02135	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0186	KHV	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02135	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0116	KHV	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG02135	hp1	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0082	KHV	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02135	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0203	KHV	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG02135	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0114	KHV	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02135	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0322	KHV	EAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	HG02135	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	KHV	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02135	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	KHV	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02135	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	KHV	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02135	hp2	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0004	KHV	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02135	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	KHV	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02135	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0021	KHV	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02135	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0314	KHV	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02135	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0131	KHV	EAS	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	HG02135	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0026	KHV	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02135	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	KHV	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG02135	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0011	KHV	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02135	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	KHV	EAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG02135	hp1	a0005	a0005c0007	a0005c0007t0003	a0005c0007t0003g0281	KHV	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02135	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0320	KHV	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG02135	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0176	KHV	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG02135	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0102	KHV	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG02135	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0061	KHV	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02135	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0149	KHV	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG02135	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0197	KHV	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02135	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0065	KHV	EAS	ABAT	chr16	8669617	8789570
ABCA2_chr9_137002234_137033237	HG02135	hp1	a0001	a0001c0036	a0001c0036t0002	a0001c0036t0002g0049	KHV	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG02135	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0047	KHV	EAS	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	HG02135	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0060	KHV	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG02135	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0130	KHV	EAS	ABCA3	chr16	2270881	2345728