Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01496	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01496	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG01496	hp1	a0005	a0005c0009	a0005c0009t0001	a0005c0009t0001g0001	CLM	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01496	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0204	CLM	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG01496	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	CLM	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01496	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0004	CLM	AMR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG01496	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0002	CLM	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01496	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0021	CLM	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01496	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0058	CLM	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01496	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0391	CLM	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01496	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0109	CLM	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01496	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0081	CLM	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01496	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	CLM	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01496	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01496	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0147	CLM	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01496	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0170	CLM	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01496	hp1	a0001	a0001c0001	a0001c0001t0044	a0001c0001t0044g0011	CLM	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01496	hp2	a0001	a0001c0001	a0001c0001t0033	a0001c0001t0033g0076	CLM	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01496	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	CLM	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01496	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0120	CLM	AMR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG01496	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	CLM	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01496	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0031	CLM	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01496	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01496	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	CLM	AMR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG01496	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0140	CLM	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01496	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0276	CLM	AMR	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG01496	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0204	CLM	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01496	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0207	CLM	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01496	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01496	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CLM	AMR	AAMP	chr2	218259129	218275137
AARD_chr8_116933207_116949487	HG01496	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01496	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01496	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0005	CLM	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01496	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0272	CLM	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01496	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01496	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	CLM	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG01496	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0088	CLM	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01496	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0036	CLM	AMR	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	HG01496	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0183	CLM	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG01496	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0118	CLM	AMR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG01496	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0277	CLM	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01496	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0149	CLM	AMR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG01496	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0175	CLM	AMR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG01496	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0057	CLM	AMR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG01496	hp1	a0007	a0007c0008	a0007c0008t0001	a0007c0008t0001g0320	CLM	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01496	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0220	CLM	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01496	hp1	a0002	a0002c0005	a0002c0005t0001	a0002c0005t0001g0225	CLM	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01496	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0019	CLM	AMR	ABAT	chr16	8669617	8789570
ABCA1_chr9_104776006_104933155	HG01496	hp1	a0005	a0005c0014	a0005c0014t0003	a0005c0014t0003g0173	CLM	AMR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG01496	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0047	CLM	AMR	ABCA1	chr9	104776006	104933155