Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA18970	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0060	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18970	hp2	a0003	a0003c0010	a0003c0010t0001	a0003c0010t0001g0136	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18970	hp1	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0254	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0053	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18970	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0156	JPT	EAS	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	NA18970	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0379	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18970	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0121	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18970	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA18970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18970	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0009	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18970	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0006	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA18970	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18970	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18970	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0156	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0298	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18970	hp1	a0002	a0002c0002	a0002c0002t0155	a0002c0002t0155g0298	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18970	hp2	a0001	a0001c0001	a0001c0001t0090	a0001c0001t0090g0119	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA18970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0178	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18970	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0266	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA18970	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18970	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0089	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18970	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18970	hp1	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0038	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA18970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18970	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0207	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18970	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0245	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA18970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0136	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18970	hp2	a0003	a0003c0007	a0003c0007t0001	a0003c0007t0001g0268	JPT	EAS	AATK	chr17	81112295	81171221
ABCA1_chr9_104776006_104933155	NA18970	hp1	a0003	a0003c0002	a0003c0002t0010	a0003c0002t0010g0270	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18970	hp2	a0007	a0007c0003	a0007c0003t0014	a0007c0003t0014g0030	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	NA18970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18970	hp2	a0004	a0004c0010	a0004c0010t0001	a0004c0010t0001g0024	JPT	EAS	ABCA2	chr9	137002234	137033237