Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02602	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02602	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PJL	SAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG02602	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0273	PJL	SAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02602	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0285	PJL	SAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02602	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0317	PJL	SAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02602	hp2	a0003	a0003c0010	a0003c0010t0003	a0003c0010t0003g0003	PJL	SAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG02602	hp1	a0004	a0004c0006	a0004c0006t0001	a0004c0006t0001g0204	PJL	SAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02602	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0170	PJL	SAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02602	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0009	PJL	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02602	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0117	PJL	SAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02602	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0375	PJL	SAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02602	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0149	PJL	SAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02602	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0062	PJL	SAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02602	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0102	PJL	SAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02602	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	PJL	SAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02602	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0105	PJL	SAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG02602	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0160	PJL	SAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02602	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0267	PJL	SAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02602	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0005	PJL	SAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02602	hp2	a0001	a0001c0001	a0001c0001t0032	a0001c0001t0032g0006	PJL	SAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02602	hp1	a0003	a0003c0009	a0003c0009t0003	a0003c0009t0003g0031	PJL	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02602	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG02602	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0062	PJL	SAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02602	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PJL	SAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02602	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0102	PJL	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02602	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02602	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0326	PJL	SAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02602	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0198	PJL	SAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG02602	hp1	a0001	a0001c0003	a0001c0003t0012	a0001c0003t0012g0088	PJL	SAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02602	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0215	PJL	SAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG02602	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0286	PJL	SAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02602	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0232	PJL	SAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02602	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02602	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02602	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	PJL	SAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02602	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG02602	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02602	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02602	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0240	PJL	SAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02602	hp2	a0008	a0008c0011	a0008c0011t0001	a0008c0011t0001g0203	PJL	SAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG02602	hp1	a0001	a0001c0001	a0001c0001t0017	a0001c0001t0017g0053	PJL	SAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02602	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	PJL	SAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG02602	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0075	PJL	SAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02602	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PJL	SAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG02602	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02602	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	PJL	SAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG02602	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0219	PJL	SAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02602	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0191	PJL	SAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG02602	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0050	PJL	SAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02602	hp2	a0035	a0035c0063	a0035c0063t0001	a0035c0063t0001g0111	PJL	SAS	AATK	chr17	81112295	81171221