Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	HG03710	hp1	a0001	a0001c0001	a0001c0001t0038	a0001c0001t0038g0168	PJL	SAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG03710	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0082	PJL	SAS	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	HG03710	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0123	PJL	SAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG03710	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0107	PJL	SAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG03710	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0185	PJL	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG03710	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0009	PJL	SAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	HG03710	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0120	PJL	SAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG03710	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PJL	SAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG03710	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG03710	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0052	PJL	SAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG03710	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0203	PJL	SAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG03710	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0335	PJL	SAS	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	HG03710	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG03710	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	PJL	SAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG03710	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PJL	SAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG03710	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0220	PJL	SAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG03710	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	PJL	SAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG03710	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	PJL	SAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG03710	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PJL	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG03710	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG03710	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0317	PJL	SAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG03710	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0210	PJL	SAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG03710	hp1	a0002	a0002c0024	a0002c0024t0060	a0002c0024t0060g0031	PJL	SAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG03710	hp2	a0001	a0001c0001	a0001c0001t0144	a0001c0001t0144g0232	PJL	SAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG03710	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0160	PJL	SAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG03710	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0251	PJL	SAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG03710	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG03710	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG03710	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG03710	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG03710	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0066	PJL	SAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG03710	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG03710	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PJL	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG03710	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PJL	SAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG03710	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0266	PJL	SAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG03710	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PJL	SAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG03710	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0058	PJL	SAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG03710	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG03710	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG03710	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0140	PJL	SAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG03710	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0084	PJL	SAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG03710	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG03710	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0215	PJL	SAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG03710	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0273	PJL	SAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG03710	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0248	PJL	SAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG03710	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0291	PJL	SAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG03710	hp1	a0004	a0004c0005	a0004c0005t0001	a0004c0005t0001g0086	PJL	SAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG03710	hp2	a0006	a0006c0017	a0006c0017t0002	a0006c0017t0002g0126	PJL	SAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG03710	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0350	PJL	SAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG03710	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0318	PJL	SAS	ABAT	chr16	8669617	8789570